Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0246 ATGGCAAAATCAAGATCAAAAGGAGGATGTTGTGGTTGGTTTATTGCGCTTGTGATTCTTGCTCTTGTAGTTGGTGCTATTGTTTATGCCGTTAAGAAGAAAATCGATAACTCAGATTCAGATAAACCAGCTCCTGTTCCTGGTCCTCCTGGTGCCATTGAACAGAAATATGCTTCTGCTCTCAAAACTGCAATGCAATTCTTCGATGTGCAAAAGTCTGGAAAGTTAGTGAACAACAAAATAAGTTGGAGAGGGGATTCCGGTCTTAAGGATGGAAGTCAAGCAAATTTAGATCTGTCAAAAGGAATGTATGATGCCGGGGATCACATGAAGTTTGGTTTTCCTATGGCTTTTACTGCCACAGTGCTATCGTGGGCGATTCTTGAATATGGAGATCAAATGGATGCTGTTGGCCAGTTGGAACCAGCTCAAGATTCACTCAGATGGATCACTGATTATCTTGTCAATGCTCACCCTTCGGAGAATGTTCTGTATATTCAGGTCGGAGATCCTGTTGCAGATCACAAGTGTTGGGATAGACCTGAGTCAATGACCGAGGCAAGACCCCTCATACAAGTGAACACATCCTGTCCTGGATCAGATGTTGCAGCTGAAACTGCAGCAGCCATGGCATCAGCATCTTTGGTCTTCAAAGAGGCAGATTCTACATATTCAAGCACTCTCCTCAAGCATGCAAAACAGTTATTTACTTTTGCGGACAAGCATAGAGGAATTTACAGTGAGAATATACCTGAAGTCGCGACATATTATAACTCAACTGGATACGGGGACGAACTTTTGTGGGCAGCTGCCTGGCTCTATCATGCTACAGGTGATAATTCTTACCTTCAGTATGCGACTGGCCAAAATGGAGAAGACTATGCTCAATTTGGAAGCCCGACCTGGTTTAGTTGGGACAACAAGCTTGCCGGAACTCAGGTTTTGTTATCCAGAATAAGCTTTTTTAAGGCAAAGGGTCTTTCCAGTTCATTTGGCTCTGGCCTACAAAATTACCGGAAAACTGCTGAGGCTGTAATGTGTGGCCTTCTTCCAGATTCTCCCACAGCCACAGAAAGCAGAACAGATCACGGTCTGATATGGGTGAGCGAGTGGAACTCTTTGCAGCAACCTGTTGCATCTGCATTCTTAGCTGCTGTTTACAGTGATTATATGCTTACAACGCAGACCCCCAAACTAAAATGTGATTCAGATTCCTTCACCCCATCAGATCTTCGAAACTTTGCCAGATCTCAGGCTGATTACGTGTTGGGCAAGAATCCTCTGCATATGAGTTTTCTGGTGGGATATGGAAACAAATACCCACAATTCGTGCATCACAGAGGCGCTTCAATTCCTGCTAATGCAAAAACAGGTTGCAAGGACGGCTTCCAGTGGCTTGACTCAACTGATCCAAATCCCAATGTAGCTACTGGAGCACTTGTTGGTGGACCCTTCTTAAATGATACTTTTATTGATTCCAGGAACAATTCTATGCAAACAGAACCAAGCACATACAACGGTGCTGTCATAGTTGGTCTGTTGTCAAGTTTAGTCACCACATCTTCGGCCGTTCAATCGTTTTCCTAA 1587 0.4398 MAKSRSKGGCCGWFIALVILALVVGAIVYAVKKKIDNSDSDKPAPVPGPPGAIEQKYASALKTAMQFFDVQKSGKLVNNKISWRGDSGLKDGSQANLDLSKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDAVGQLEPAQDSLRWITDYLVNAHPSENVLYIQVGDPVADHKCWDRPESMTEARPLIQVNTSCPGSDVAAETAAAMASASLVFKEADSTYSSTLLKHAKQLFTFADKHRGIYSENIPEVATYYNSTGYGDELLWAAAWLYHATGDNSYLQYATGQNGEDYAQFGSPTWFSWDNKLAGTQVLLSRISFFKAKGLSSSFGSGLQNYRKTAEAVMCGLLPDSPTATESRTDHGLIWVSEWNSLQQPVASAFLAAVYSDYMLTTQTPKLKCDSDSFTPSDLRNFARSQADYVLGKNPLHMSFLVGYGNKYPQFVHHRGASIPANAKTGCKDGFQWLDSTDPNPNVATGALVGGPFLNDTFIDSRNNSMQTEPSTYNGAVIVGLLSSLVTTSSAVQSFS* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0246 528 PANTHER ENDO-1,4-BETA-GLUCANASE 10 527 - -
Tpr7g0246 528 PANTHER ENDOGLUCANASE 2 10 527 - -
Tpr7g0246 528 SUPERFAMILY Six-hairpin glycosidases 55 520 IPR008928 GO:0005975
Tpr7g0246 528 Pfam Glycosyl hydrolase family 9 57 514 IPR001701 GO:0004553|GO:0005975
Tpr7g0246 528 Gene3D - 53 521 IPR012341 GO:0005975
Tpr7g0246 528 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 421 447 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0246 Tpr-Chr7 1991867 1995882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0246 3 527 Glycoside Hydrolase AT1G75680 70.342 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0246 - - gmx:100812226 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0246 7 1991867 1995882 Tpr7g0246 7 1991867 1995882 ECH