LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g0224	ATGGACACCGCTACCCCAAAATCATGCCCTTACACCGTCACCGTTCGCCGGAACCCTCCCCGGAGAGCTCGCGCTACCCCACTACCACAAGGTTCAAACATATACGGAATCACACCATTTCCTAACGACGATTTGTTATCTCAACAAATACCACAAAATCCTTCATCAACATCGGAGAACGAGAATCTGAAAGTTTTCCTCAGAATCAGACCTTTTCAATCTCCCACTCAAGCTCCCCAAGCGAGAGCAAAAACCGCTTGGCCTAAAAACCCAGCGAAAAAGATCACAACATCAGGGATTAACTCTACCAAGAAGAAGAGCTATTCTTCTTGCATTTCGATTAACGATTCGGAATCAGTAACGTTATTAGTTCCTTCTGATTTGCAAGAATCGAAGAGACTGAAATCAGAAACTTACGGTGGTTTCACTCACGTTTTTTCTTCTGATTCATCTCAGGTTGAAGTATATGATAGAATGGTGAAACCAATGGTGGATGAGTTTATCAAGGGTAAAAGTGGAATGTTGGCTGCATTGGGTCCTAGTGGTTCCGGTAAGACTCATACCGTTTTCGGAACCCCAAGGGACCCTGGTATGGTGCCTCTTGTTTTGCGACATATTTTCAAAGAGACGGAGTCTGCTAGATCCTTTTACATAGCTATATTTGAGATATATACTGAACGAGGAAAAGCAGAAAAACTGTTTGATTTATTACCAGATGGCGGCGAACTAAGTATGCAACAATCCACCATAAGAGGCCAAAAAGAGGTTCTCATCTCTAATGCTGAACAGGCAGAATCCTTGATAGCACATGCTGTGATAAAACGTGCAACGGCAATGACAAATACAAACAGTCAGTCAAGTCGGTCACAGTGCATCATAAGCATTCGTGATGTTCCTAAAAAATGGAAAGGAGTGGTCAATTATAAGTCAAGCGATGCTGTTTTGACTATCATTGACCTTGCTGGAGCAGAAAGAGAAAAAAGAACAGGAAATCAGGGGACAAGATTGGTTGAAAGCAATTTTATCAACAACACATTGATGGTGTTTGGCTTATGTTTAAGATCTCTATTGGAGCACCAAAAAAATCCCAAGAAACAATTGCAGAAGCACTTTCAAAATTCTATGTTAACAAGGTATTTGCGAGATTATTTAGAGGGCAAGAAGCGCATGACCTTGCTTTTAACAGCAAAGTCAGGAGAGGATGATTATCTCGATACTTCTCACCTACTTAGACAGGCCTCTCCTTACATGCAAATCAAGTATAATATAGTTGAACCATCAAATATGGTTCCCAAAAAAAGGCATCATCAACCTTCTTCCGTAATTGATAATGCAAAGCAATTGCCTTCATTAGCACATTTAAAGAGAATGAGACTCGTTAGTGAACATACTGTGCAGAATGATGAAAAGGGTGTTGATGAATGTATCACTTCGAAGAAAGTGTGTAAATTAGATGCTAGCAGTTCTGTCTCTTTAAAGTTGGAGTGTGATAGCCACTCTGGGAATGATAGAAGTCACATTATAATGAGGAATTTTGCAAGAGTCTTATGGAATGTATTGAAGGAATATAATTCCAAACTGAAGGTTGCGGAAAGCAAAATACTAAGTCTCAATGAAAGCATAGGATACGAAAAGAAAAAAAATATAGAGTTGGAAACGCAGCTGAATGAGTTTAGGGCTGCCTGTTGTTGCAAAGGAGGAAACGAAAAAATCGATACTGAAGACTGTTCATCAGTTGATCATGATCACCCACATAATTTGGACCAAGAGAAAAGGATTGATGCAGCGTCAGCATCTGAGCTTATAATTGACGATTCAGATGAAGAGCTTACACTGGGTACTACTAATTCAGAGTTAGATTATAAAGAATCAGAAAGGAAACTTTCAGTCTCCTCAACAGAGTCAGGATATCATAATGCTTTGAAGCTTGATGATGTAAGCAAGGAAACATTTCATGCAGAGTTATCATCTCTTCCGAGACTTGAACAGTCAGATGACGAGCATCCACGTCATCATTTCATTGATTACGAAAAATCAGATTGGGAACCCTCGGACTTCTTGTCGAATTTGGGGCACCATAATGCTGTGGAGGTGGATGTTGTGAGCAAGATATCTAGTGAAACAATTGACTCAGAGTCAGCATCTGAGCCTATAATTGACCAGTCAGATGAAGAGTATACACCGGGTACTACGAATGCTGAGTTAGATTCTAAAGAATCAGAAAGGAAACTTTCAGTGTCCTCAACAGAGTCAGGACATCATAATAATGCTTTGGAGGTGGATGTTGTGAGCAAGATATCTAGTGAAACATTTAATGCAGAGTCATCATCAGAGCCGGTACTTGACCAGTCAAATGCTGAGCATATGCTTTGTACTACATGTTCAGAGTTAGATTATGAAAAACCGGAAAGGAAACTCTCTGTCTCGTTGTCAAAGCCAGGGCATTCTAATGCATTGGAGGTTGATGCTGCAGACAAGATACCTTGTGAAACATTTCATTTAGAGTCATCATCTCAGCCAACACTTGAACAGTCAGATGAAGAGCATATGCTGGATTTTACTAGTACGATTTTAGATTCTGATAACTCCGAAAGGGAAGTCTCTGCATCGTTATCAAAGCCAGAAATTTGTAAGGCTTTTGAAGTTGATGCTGTGAGGAAGGTACCTAAGGAAACAATTCATTTTGAGTCATCATCTCAGCCAACACTTGACCAGTCGGATGAAGAGCACATGCTTGGTTCTACTAGTACGATTTTAGATTCTGAAAACTCCGAAAGGGAAGTGTCTGCATCCTTATCAAAGCCAGAAATTTTTGAAGTTGATGCTGTGAGGAAGGTACCTAAGGAAACATTCAGTGCAAAGTCATTATCTAAGCCTAGAATTGACCATTCGGATGAAGAGCATGTGCTCGGTGCCACCTGTACGACGTTAGACTCTGAAATATCAGATAGGGAAGTCTTGGTCTCTTCTTCAGAGCCTGTGCATGATAATTCTTTGGAGGTTGATGCTGTGAGCAAGATACCTAGTGAAACATTTCACACACAGTCATCATCAGAGCCTAGACTTAACCTCTCAAGTGAAGAGCCGACGATTGGACCTTCTTGTACACAATTCGTGTCTGAAAAATCAGATAGTTTAGTCTTGTGTGTTTCGTCCTCCTCGTCAAAATCAGGGGATCATAATGATTTGGAAGTAGATGCTAAGAGCAAGATACCGAGTGAATTGTTCGGTTCTTCTTTATCAACAAAAATTGACATTTTGGATCCTTCATCGCCCAAAGATGTTTCATCTACTAAAGCCCAGACTGATAAAGGAGTCAATAACTCCCGTAAACCTCCTAGGCCGAAAAGGACACTTATGCCTTCCTCATCCATGTTATCAAGAAACTTGAGCACCTTTGATCTTTTTGACGAAACCGATAAATTGAAGGGGAATAGAAGCACAAGGAAATTGGGTGCACGTGATGATCCTAAAAGATCAAATGGAAGTATCTCTCTGCTCAATTTGCTCCAACAGAGAAAAAGCAATATTCGTCACTAG	3540	0.4042	MDTATPKSCPYTVTVRRNPPRRARATPLPQGSNIYGITPFPNDDLLSQQIPQNPSSTSENENLKVFLRIRPFQSPTQAPQARAKTAWPKNPAKKITTSGINSTKKKSYSSCISINDSESVTLLVPSDLQESKRLKSETYGGFTHVFSSDSSQVEVYDRMVKPMVDEFIKGKSGMLAALGPSGSGKTHTVFGTPRDPGMVPLVLRHIFKETESARSFYIAIFEIYTERGKAEKLFDLLPDGGELSMQQSTIRGQKEVLISNAEQAESLIAHAVIKRATAMTNTNSQSSRSQCIISIRDVPKKWKGVVNYKSSDAVLTIIDLAGAEREKRTGNQGTRLVESNFINNTLMVFGLCLRSLLEHQKNPKKQLQKHFQNSMLTRYLRDYLEGKKRMTLLLTAKSGEDDYLDTSHLLRQASPYMQIKYNIVEPSNMVPKKRHHQPSSVIDNAKQLPSLAHLKRMRLVSEHTVQNDEKGVDECITSKKVCKLDASSSVSLKLECDSHSGNDRSHIIMRNFARVLWNVLKEYNSKLKVAESKILSLNESIGYEKKKNIELETQLNEFRAACCCKGGNEKIDTEDCSSVDHDHPHNLDQEKRIDAASASELIIDDSDEELTLGTTNSELDYKESERKLSVSSTESGYHNALKLDDVSKETFHAELSSLPRLEQSDDEHPRHHFIDYEKSDWEPSDFLSNLGHHNAVEVDVVSKISSETIDSESASEPIIDQSDEEYTPGTTNAELDSKESERKLSVSSTESGHHNNALEVDVVSKISSETFNAESSSEPVLDQSNAEHMLCTTCSELDYEKPERKLSVSLSKPGHSNALEVDAADKIPCETFHLESSSQPTLEQSDEEHMLDFTSTILDSDNSEREVSASLSKPEICKAFEVDAVRKVPKETIHFESSSQPTLDQSDEEHMLGSTSTILDSENSEREVSASLSKPEIFEVDAVRKVPKETFSAKSLSKPRIDHSDEEHVLGATCTTLDSEISDREVLVSSSEPVHDNSLEVDAVSKIPSETFHTQSSSEPRLNLSSEEPTIGPSCTQFVSEKSDSLVLCVSSSSSKSGDHNDLEVDAKSKIPSELFGSSLSTKIDILDPSSPKDVSSTKAQTDKGVNNSRKPPRPKRTLMPSSSMLSRNLSTFDLFDETDKLKGNRSTRKLGARDDPKRSNGSISLLNLLQQRKSNIRH*	1180

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g0224	1179	MobiDBLite	consensus disorder prediction	1161	1179	-	-
	Tpr7g0224	1179	Coils	Coil	520	540	-	-
	Tpr7g0224	1179	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	55	420	IPR027417	-
	Tpr7g0224	1179	MobiDBLite	consensus disorder prediction	1087	1124	-	-
	Tpr7g0224	1179	MobiDBLite	consensus disorder prediction	1141	1157	-	-
	Tpr7g0224	1179	ProSiteProfiles	Kinesin motor domain profile.	62	419	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Tpr7g0224	1179	MobiDBLite	consensus disorder prediction	1141	1179	-	-
	Tpr7g0224	1179	Pfam	Kinesin motor domain	127	416	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Tpr7g0224	1179	PANTHER	KINESIN-RELATED	60	677	IPR027640	GO:0003777\|GO:0007018
	Tpr7g0224	1179	MobiDBLite	consensus disorder prediction	1087	1108	-	-
	Tpr7g0224	1179	Gene3D	Kinesin motor domain	53	428	IPR036961	-
	Tpr7g0224	1179	PANTHER	KINESIN-LIKE PROTEIN KIF23	60	677	-	-
	Tpr7g0224	1179	PRINTS	Kinesin heavy chain signature	170	191	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Tpr7g0224	1179	PRINTS	Kinesin heavy chain signature	280	297	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Tpr7g0224	1179	PRINTS	Kinesin heavy chain signature	314	332	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Tpr7g0224	1179	PRINTS	Kinesin heavy chain signature	369	390	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Tpr7g0224	1179	SMART	kinesin_4	60	427	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Tpr7g0224	1179	MobiDBLite	consensus disorder prediction	707	758	-	-
	Tpr7g0224	1179	MobiDBLite	consensus disorder prediction	1	29	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g0224	Tpr-Chr7	1845513	1859014	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr7g0224	31	432	Miscellaneous Gene Families	AT2G21380	27.078	1.12e-25	113

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g0224	K10401		-	gmx:100794655	956.051

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr7g0224	7	1845513	1859014	Tpr7g0224	7	1845513	1859014	ECH