Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0160 ATGGACCTTCGCCGCTTAACTCTCCTTTCTCTATTACAGGTTTGCTTAATTTTATCTTTAACAGAAGCACAATCGGCATCTAATGATAAAACACTACGGGAAAGACATTCTGAGGATTATTGTGCAATGTATGATATTTGTGGAAAGCGAAGTGACGGTAAAGTAGTGAATTGTCCATATGGTTCTCCTGCTGTGAAGCCAGATGATTTGCTTTCATCGAAGATCCAAAGTTTGTGTCCGACTATTACTGGGAACGTTTGCTGTTCAGAAGCTCAGTTTGAAACATTAAGGCAGCAAGTGCAACAGGCAATTCCTTTTCTTGTAGGTTGTCCAGCATGCTTAAGAAATTTTCTGAATCTATTCTGCGAGCTTACTTGCTCTCCAAATCAGAGTTTATTTATCAATGTGACTTCAGTTGACAAGGTTGGTGGTAATTTGACAGTGGGTGGCATCGATTATTTTGTAAGTGACACATTTGGCGAAGGGTTATATGACTCCTGCAAGGATGTAAAGTTTGGCTCCGCGAATACTCGAGCCATGGACTTACTTGGCGCTAGGGCTAAGAATGTTAAAGAGTGGTTTACTTTTATTGGTAAAAAAGCAACCCCTGGTGGTCTTGGTTCACCATATGCAATTGCCTTCCAGCCAAATGCAACCAAGTCATCTGGAATGGAACCTATGAATGTTTCAGCCTATTCATGCGGTGATATTTCTCTTGGCTGTTCTTGTGGTGACTGTCCTTCATCTTCAGTGTGCTCTAGTTCATCTTCAACTACCACCCAAAAGAGGGATTCATGCTCCTTGAAAATTGGGAATTTAATGGTGAAGTGTGTTGACTTGATTTTAACAGTCTTATACATCATACTGATATGTGTGCTCTTGGGTTGGGGATTGTATCATCGGAAAAGGGAAAGAAAGCCGGCATATAGAACAAAGTCGGTGTCTAATGTCATTAGTGGCGGCGTACTGTATTCTCGTAATCAGGAGAAGGACGAGAACCTCCCAATGCATCAGATTATTGAAGATGTTTCACAAAATAGAAACGAAGTACGACTCTCACCTGTGCAAGGATACATGTCAAATTTTTACAGGAAGTATGGATCATACGTAGCTAGAAACCCAATTATGGTCTTGGCTACATCTTTGGTTATAGTTATTCTACTTTGTCTGGGTCTAATCAGATTAAAGGTTGAAACGCGGCCTGAGAAGCTCTGGGTGGGACCTGGGAGTAAAGCGGCTGAAGAGAAGCAGTTTTTTGACAGCCATCTTGCTCCATTTTACAGAATTGAACAGCTCATACTGGGAACAGTTCCAGATCATGTGAATAGTACATCATCAAGAATTGTGTCAGAGGACAACATTAGGTTTCTGTTTGAAGTACAAAAGAAGGTTGATGCAATTCGTGCTAATTATTCTGGCTTGATGGTATCTCTCCAAGACATCTGTATGAAGCCACTAGACAAAGATTGTGCCACACAAAGCATTCTTCAGTACTTCAAAATGGATCCCAACAATTTCGACAATTATGGTGGAGTTGAGCATCTCAATTACTGTTTTGAGCATTATTCCTCAGCAGATAAATGTCTGAGTGCATTTAAAGGTCCTCTTGATCCAAGCACTGTATTAGGAGGTTTTTCTGGGAATAACTATTCTGCGGCTTCTGCATTTATTGTAACCTACCCAGTAAATAATGCTATTGATGAAGAAGGCAATGAAATTGCAAAGACAGTTGCTTGGGAGAAGACCTTTATTCAGTTAGTGAAGGACGAGTTGTTACCAATGGCACAGTCAAAAAATTTGACACTTGCTTTTTCATCTGAAAGCTCTATTGAGGAAGAATTGAAAAGAGAAAGTACTGCAGATGTTATTACTATATTGGTCAGCTATCTTGTGATGTTTGCTTATATATCTCTTACTTTAGGGGATACACCCCAGCTTTCTTCTTTCTATATTTCATCTAAGGTATTGCTTGGTCTTTCAGGAGTAATTCTTGTCATGCTGTCTGTCCTTGGATCTGTTGGAATTTTTAGTGCTCTTGGTGTAAAATCTACTCTGATCATCATGGAAGTTATCCCATTTCTTGTTCTAGCTGTTGGGGTGGATAATATGTGTATACTGGTTCATGCTGTGAAAAGGCAAGAGCTGGAGTTGCCTTTAGAAAGAAGGATAAGCAATGCACTTGTTGAAGTTGGACCATCAATAACATTGGCTAGTTTATCAGAGGTTATAGCATTTGCAGCTGGAAGCTTTATTTCCATGCCCGCATGTCGTGTCTTCTCCATGTTTGCAGCATTGGCCGTCCTTTTAGACTTTCTCCTGCAAGTTACTGCATTCGTAGCTCTGATAGTTCTTGACTCTTTAAGAGCAGAGGATAAGAGGGTTGATTGTTTCCCATGCATAAAAGTGCCTTCTTTGCATGCAGACCCTGATAAAGGCACTGAACAAAGGAAACCTGGTTTGTTGGCTAGATACATGAAGGAGGTTCATGCTCCAATTCTAAGTATTTGGGGAGTAAAAATAGTTGTCATTGCAATTTTTGTGGCATTTGCATTGGCTAGCATTGCTTTGAGCACTAGAATTGAACCTGGATTGGAGCAGGAGATTGTTCTTCCCCGAGACTCATATCTTCAGGGGTATTTTAAAAATGTTTCAGAATATCTCAGAATTGGGCCACCTTTGTATTTTGTTGTGAAGAACTATAACTACAGCTCCGAATCAACACATACAAATCAGCTTTGCTCCATAAGCCAATGCAATTCAGACTCTCTTTTAAATGAGATCTCTAAAGCGGCCCTAGTACCAGACACAAGTTATATTGCCAAACCAGCTGCTTCTTGGCTCGATGATTTTCTTGTGTGGGTATCTCCAGAAGCATTTGGGTGCTGCAGGAAGTTCACTAATGGGAGTTATTGCCCTCCTGACGACCAGCCTCCTTGCTGTGCTCCTGGAGAAGGCTCTTGTGTTTCACTTGGAGTATGTAATGATTGCACAACGTGTTTCCATCATTCAGATCTCCATAAAGATCGTCCTTCCACAACACAATTTAGGGAGAAATTGCCGTGGTTTCTTAGTGCTCTTCCATCTGCTGACTGTGCAAAAGGAGGTCATGGGGCGTACACCAGCAGTGTTGAACTGAAAGGCTATGACAGTGGCATTATTCAAGCATCATCATTCCGTACATATCATACCCCACTCAACAAGCAGGCCGACTTTGTTAATTCCATGAGGGCTGCTCGAGAGTTCAGTTCAAGGGTTTCTGATTCTTTGAAGATTGAGATCTTCCCTTATTCAGTGTTTTATATGTTTTTTGAGCAATACCTTAATATATGGAAGACTGCACTGGTCAATCTTGCAATAGCTATTGGTGCAGTGTTTATTGTGTGCTTGGTTATCACATGCAGTTTATGGAGTTCAGCGATCATTTTGTTGGTGTTGACAATGATTGTTGTTGATCTTATGGGTGTGATGGCCATTCTAAATATCCAATTGAATGCCGTCTCAGTTGTCAACCTCGTTATGTCAGTGGGCATTGCTGTGGAGTTTTGTGTGCATATGACTCATTCTTTCACTGTTGCAACTGGAGATAAAGATCAGCGTGTTAAGGAGGCTCTAGGTACAATGGGTGCTTCAGTCTTCAGTGGTATCACACTAACAAAATTGGTTGGAGTTATCGTACTTTGCTTCTCAAGAACAGAAGTTTTTGTGGTTTATTACTTTCAAATGTACTTGTCGTTAGTACTTCTTGGTTTTTTGCACGGACTTGTTTTCTTGCCGGTGGTATTGAGCATGTTTGGTCCACCTTCAAGATGTACAGTTACTGACCAGGGGGAAGGTCGTTCATCAACTTCTTAG 3852 0.4089 MDLRRLTLLSLLQVCLILSLTEAQSASNDKTLRERHSEDYCAMYDICGKRSDGKVVNCPYGSPAVKPDDLLSSKIQSLCPTITGNVCCSEAQFETLRQQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVDKVGGNLTVGGIDYFVSDTFGEGLYDSCKDVKFGSANTRAMDLLGARAKNVKEWFTFIGKKATPGGLGSPYAIAFQPNATKSSGMEPMNVSAYSCGDISLGCSCGDCPSSSVCSSSSSTTTQKRDSCSLKIGNLMVKCVDLILTVLYIILICVLLGWGLYHRKRERKPAYRTKSVSNVISGGVLYSRNQEKDENLPMHQIIEDVSQNRNEVRLSPVQGYMSNFYRKYGSYVARNPIMVLATSLVIVILLCLGLIRLKVETRPEKLWVGPGSKAAEEKQFFDSHLAPFYRIEQLILGTVPDHVNSTSSRIVSEDNIRFLFEVQKKVDAIRANYSGLMVSLQDICMKPLDKDCATQSILQYFKMDPNNFDNYGGVEHLNYCFEHYSSADKCLSAFKGPLDPSTVLGGFSGNNYSAASAFIVTYPVNNAIDEEGNEIAKTVAWEKTFIQLVKDELLPMAQSKNLTLAFSSESSIEEELKRESTADVITILVSYLVMFAYISLTLGDTPQLSSFYISSKVLLGLSGVILVMLSVLGSVGIFSALGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQELELPLERRISNALVEVGPSITLASLSEVIAFAAGSFISMPACRVFSMFAALAVLLDFLLQVTAFVALIVLDSLRAEDKRVDCFPCIKVPSLHADPDKGTEQRKPGLLARYMKEVHAPILSIWGVKIVVIAIFVAFALASIALSTRIEPGLEQEIVLPRDSYLQGYFKNVSEYLRIGPPLYFVVKNYNYSSESTHTNQLCSISQCNSDSLLNEISKAALVPDTSYIAKPAASWLDDFLVWVSPEAFGCCRKFTNGSYCPPDDQPPCCAPGEGSCVSLGVCNDCTTCFHHSDLHKDRPSTTQFREKLPWFLSALPSADCAKGGHGAYTSSVELKGYDSGIIQASSFRTYHTPLNKQADFVNSMRAAREFSSRVSDSLKIEIFPYSVFYMFFEQYLNIWKTALVNLAIAIGAVFIVCLVITCSLWSSAIILLVLTMIVVDLMGVMAILNIQLNAVSVVNLVMSVGIAVEFCVHMTHSFTVATGDKDQRVKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLSLVLLGFLHGLVFLPVVLSMFGPPSRCTVTDQGEGRSSTS* 1284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0160 1283 Gene3D Multidrug efflux transporter AcrB transmembrane domain 1072 1269 - -
Tpr7g0160 1283 Pfam Patched family 1049 1264 IPR003392 GO:0016021
Tpr7g0160 1283 Pfam Patched family 476 900 IPR003392 GO:0016021
Tpr7g0160 1283 Gene3D Multidrug efflux transporter AcrB transmembrane domain 582 793 - -
Tpr7g0160 1283 SUPERFAMILY Multidrug efflux transporter AcrB transmembrane domain 580 784 - -
Tpr7g0160 1283 PANTHER NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1 6 1283 - -
Tpr7g0160 1283 PANTHER PATCHED FAMILY PROTEIN 6 1283 - -
Tpr7g0160 1283 ProSiteProfiles Sterol-sensing domain (SSD) profile. 621 784 IPR000731 -
Tpr7g0160 1283 TIGRFAM 2A060601: Niemann-Pick C type protein family 41 1265 IPR004765 GO:0005319|GO:0016021
Tpr7g0160 1283 Pfam Niemann-Pick C1 N terminus 39 272 IPR032190 -
Tpr7g0160 1283 SUPERFAMILY Multidrug efflux transporter AcrB transmembrane domain 1074 1265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0160 Tpr-Chr7 1301958 1318343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0160 32 1283 Miscellaneous Gene Families AT1G42470 73.243 0.0 1857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0160 K12385 - gmx:100813262 2162.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0160 7 1301958 1318343 Tpr7g0160 7 1301958 1318343 ECH