Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0152 ATGGCAGCGCCGAACATGGATCAGTTCGAAGCGTTTTTCAGAAGAGCAGATTTAGACGGTGATGGTAGAATCAGTGGTGCTGAGGCTGTCAATTTCTTTCAGGGATCCAATTTACCTAAACACGTTCTTGCTCAGGTATGGATGCATGCTGATCAAGCTAAAACTGGTTTCCTTGGGCGGAATGAGTTTTTTAATGCTTTGAGATTAGTAACTGTTGCACAGAGTAAGCGAGATTTAACTCCTGATATTGTAAAAGCAGCGTTATTTGGTCCGGCTGCTGCTAGAATTCCAGCTCCGCAGATAAATCTTGCTGCTATACCGCCACAACGACCGAATCCAGTGGCTGCCCCATCTGTTGGGCAGATGGGTGTGAGTGCTGGACCTACATCAGCTCAAGGTTATGCCTATAGAGGACCGGGGTTAACAGGTTCTCCTGCGAACCCACAATATCTTCCTTCGCAGCAGAATGCTAACATGAGACCGCCTCAATCACAGGGGTTTGCCGGTTCAGTTGGGAACCAGCAATATATACCTTCCCAGCAGAGTGCTAACATGAGACCACCTCAATCACAGGGGTTTGCAAGTTCTGTTGGGAACCAGCAATATCTACCTTCCCAGCAGAGTGCTAACATGAGACCACCTCAATCACAGGGGTTCCCAGGTTTTGTTGCAAACCAGCAATATCCACCTTCCCAGCAGAGTCCTACCATGAGACTACCTCAATCACAGGGGTTCCCGGGTTCTGTTGCAAACCAGCAATATCCATCTTCCCAGCAGAGTCCTATCATGAGACCACCTCAATCACAGGGGTTAGCCGGTTCTGTTCCAAACCAGCAATATCTTCCTTCCCAGCAGAGTCCGACCATGAGACCAACTCAATCCATGCCTGCTGGTAGTGCCCCTGGTCCACAACAATTCATGCCTGCTGGTAACACTCCCCGTCCACAACAATCATTGCCCGCTGGCACATCCCCTCATCCACAACAGGGCTTTGCAGGTCCCAATCTCTCAAATGCTAGCATCTCAAATGATTGGAATGGTGGAAGGACTGGTATGGCTCCTTCTAGGCCTGCAGGAATCACTCCATCAGTTGCCTTATCAACACCAACATCACCATCTCCGGTCTCACCAATGTCACAGCCAACAGCTGTTACCACTAAAGCATTGGCTGTTTCTGGAAATGGGTACCCTTCAAATTCAGTTTTGGACGAAGATTTATTCTCTACTGCTGCATCCACACCGAAACAAGACCCTACTCGACAGAATTATAATGTTAGCAGTGCACCTGCTTCATCATCCATTGTTCCAGTTTCCAATAGTGCCCTCCCTGCAAGTAGGAAAAGTTCACTTGATTCATTGCAGAGTTCATTCTCAATGTCACCTACAAATAGTCAGATTCCGCGGGCACATTCTTTACCAAATACAAACCAGCAAATTTCACCACCAGCTTCTTCTCCGCTGACCACATCTGGGAGATCGGTTGGACCTGGAAATACTAGTTCTGACAACTCACAGCCTCCGTGGCCAAAAATGAAACCTTCTGATGTCCAGAAGTATACAAAGGTGTTTATGGAAGTTGACACCGACAGGGATGGGAAAATCACGGGGGAGCAGGCACGCAGTCTATTTTTAAGTTGGAGATTACCAATAGATGTCTTAAAGAAGGTGTGGGACTTATCTGATCAGGATAATGATAGCATGCTTTCTTTGAAGGAGTTTTGCTATGCTCTTTATTTGATGGAGCGGTACAGGGAAGGTCGTCCTCTTCCACAGTCTCTTCCAAATAATGTTATATTTGACGAAACATTGATGTCTATGACGGGGCATCCAAAAACCTCTTATGGAAATGCAGCATGGGGGGTAGGCCCAGGTTTTCAGCAGCAACAAGGGATGCCAGGTGCTCAGCCAGCGGCACCAGCAGTGCAAGGAACGCCTGCTCAGGCTGATGGCACTTTGCCACCTGATCAGAAAAAGCTTGGAACATCTGCGTTGGATGATTCCTTTTTGAATAACACAGATAATAGTGAGCAAAATATTGAGACTGCAGGGGAAAAGGCTGAAGAAACACAGAATGTGATATTGGATTCAAGAGAGAAGATTGAGTTGTACCGCAACAAAATGCAGGAATTGGTCCTGTATAAAAGCAGATGTGATAACCGCCTAAATGAGATTACAGAAAGGGCATCTGCAGATAAGCGTGAGGCAGAATCATTGGGCAAGAAATATGAAGAGAAATACAAACAAGTGGCAGAAATAGCATCCAAATTGACTGTAGAAGAGGCTAAATTTCGTGATATACAGGAAAGGAAGACAGAATTGCAGCAAGCCATCATTAAAATGGAACAAGGAGGCAGTGCAGATGGTATTCTTCAGGTTCGTGCTGATCGCATACAATCAGATCTCGAGCAGTTATTTAAAGCTCTTGCTGAACGGTGCAACAAACATGAGATAAATGTGAAGTCAATTGCAATGGTTCAGCTTCCTGATGGTTGGCAACCCGGAAATCCAGAGGAGGCAGCTGTTTGGGATGAAGATTGGGATAAATTTGAAGATGAAGGATTTGCCAATGATCTCACTTTTGATACCAAAAATGCATCTTCAGAGCCAAAACCTTCATCCGTTCCCGCAGAACAAAATTCCTTTGATGATAATTCAGTTTATGGTTCACCTGTGAATGCAAATGGGAGGCAAGAACATTTTACTAATGGTGATTATACAGTTGAGGAGGAATCTTCTTATGCACAGAGTGAAGGCTCGGCAAGAAGCCCCCGCGATAGCCCATTTGGAAGGAATACAGCAGAGAGTCCTTCTAAAGAGTTTTCAAATGCTCATTTGAAAAAAGTCCCGAAGCAGATGCTGAAACACATAGGTAATTTGTTCTTTGTTTTTTCTTTCGGTCATGAAGGGTTGGTTTTTGTCACTTGTCATCCTTTATTCCATTTTTTTCCTTCTGTTTCTGCAATCTGTGGCTTTAAATGTGGTGCATTTAGTAATTGTGATGTTGATATATTTATCAGAAGTTTTGATGAATCAACCTGGGGTGCATTTGACAATAATGATGATGTGGACTCTGTGTGGGGTTTTAACACCAAGGACTCTGACTTGGAGAAGCAGGGAGATTTCTTTAAATCTGGTGATTTTGGTCTAAACCCAGTTAGAACAGGATCTACATTTACAGACGGTGCGTTCCAGACAAAAAGCCCATTTGCTTTTGATGATTCGGTGCCTGGAACTCCATTTTCCAAGTTCGGAAACTCTCCAAGGTACAGCGAGGCAGGGGATCACTTCTTTGACACGTCAAAGTTCGATTCCTCCTTCAGCATGCATGAAAGTGGAAATTCTCCACGATTTACAAGATTTGATTCCATTAGTAGCAGCAGGGATTTTGGCAACAATCAAGAGAAATTTTCAAGGTTTGATTCCATTAGTAGCAACAAAGATTTTGGCTACAATCAAGACAAACTTTCAAGGTTTGATTCCATTAGTAGCAGCAAGGATTTTGGCTACAATCCTGATAAATTTTCAAGGTTTGATTCCATGAGTAGTAGCAAAGACTTTGGTTACAATCCTCCCGAGACGCTAACAAGATTTGATTCCATGAGTAGCAGCAAAGATATCGGCTTCGGTAGTCAGGGACATACGAGGTTTGACTCAATTAGTAGCTCCAAGGACTTAGGCTACAGTGCTCCATTCTCTTTCGATGACTCTGATCCATTCGGCTCCTCTGGCCCATTTAAGGTCTCTTCAGAGAATCAATCTCCGAAGAAAAGCTCTGATAAATGGAGTGCATTCTAG 3795 0.4437 MAAPNMDQFEAFFRRADLDGDGRISGAEAVNFFQGSNLPKHVLAQVWMHADQAKTGFLGRNEFFNALRLVTVAQSKRDLTPDIVKAALFGPAAARIPAPQINLAAIPPQRPNPVAAPSVGQMGVSAGPTSAQGYAYRGPGLTGSPANPQYLPSQQNANMRPPQSQGFAGSVGNQQYIPSQQSANMRPPQSQGFASSVGNQQYLPSQQSANMRPPQSQGFPGFVANQQYPPSQQSPTMRLPQSQGFPGSVANQQYPSSQQSPIMRPPQSQGLAGSVPNQQYLPSQQSPTMRPTQSMPAGSAPGPQQFMPAGNTPRPQQSLPAGTSPHPQQGFAGPNLSNASISNDWNGGRTGMAPSRPAGITPSVALSTPTSPSPVSPMSQPTAVTTKALAVSGNGYPSNSVLDEDLFSTAASTPKQDPTRQNYNVSSAPASSSIVPVSNSALPASRKSSLDSLQSSFSMSPTNSQIPRAHSLPNTNQQISPPASSPLTTSGRSVGPGNTSSDNSQPPWPKMKPSDVQKYTKVFMEVDTDRDGKITGEQARSLFLSWRLPIDVLKKVWDLSDQDNDSMLSLKEFCYALYLMERYREGRPLPQSLPNNVIFDETLMSMTGHPKTSYGNAAWGVGPGFQQQQGMPGAQPAAPAVQGTPAQADGTLPPDQKKLGTSALDDSFLNNTDNSEQNIETAGEKAEETQNVILDSREKIELYRNKMQELVLYKSRCDNRLNEITERASADKREAESLGKKYEEKYKQVAEIASKLTVEEAKFRDIQERKTELQQAIIKMEQGGSADGILQVRADRIQSDLEQLFKALAERCNKHEINVKSIAMVQLPDGWQPGNPEEAAVWDEDWDKFEDEGFANDLTFDTKNASSEPKPSSVPAEQNSFDDNSVYGSPVNANGRQEHFTNGDYTVEEESSYAQSEGSARSPRDSPFGRNTAESPSKEFSNAHLKKVPKQMLKHIGNLFFVFSFGHEGLVFVTCHPLFHFFPSVSAICGFKCGAFSNCDVDIFIRSFDESTWGAFDNNDDVDSVWGFNTKDSDLEKQGDFFKSGDFGLNPVRTGSTFTDGAFQTKSPFAFDDSVPGTPFSKFGNSPRYSEAGDHFFDTSKFDSSFSMHESGNSPRFTRFDSISSSRDFGNNQEKFSRFDSISSNKDFGYNQDKLSRFDSISSSKDFGYNPDKFSRFDSMSSSKDFGYNPPETLTRFDSMSSSKDIGFGSQGHTRFDSISSSKDLGYSAPFSFDDSDPFGSSGPFKVSSENQSPKKSSDKWSAF* 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0152 1264 Pfam Cytoskeletal-regulatory complex EF hand 509 598 IPR000261 GO:0005515
Tpr7g0152 1264 MobiDBLite consensus disorder prediction 908 941 - -
Tpr7g0152 1264 MobiDBLite consensus disorder prediction 252 272 - -
Tpr7g0152 1264 ProSiteProfiles EH domain profile. 515 598 IPR000261 GO:0005515
Tpr7g0152 1264 Coils Coil 756 776 - -
Tpr7g0152 1264 Pfam EF hand 10 26 IPR002048 GO:0005509
Tpr7g0152 1264 Gene3D - 497 600 - -
Tpr7g0152 1264 Gene3D - 3 99 - -
Tpr7g0152 1264 SMART efh_1 552 580 IPR002048 GO:0005509
Tpr7g0152 1264 SMART efh_1 518 546 IPR002048 GO:0005509
Tpr7g0152 1264 SMART efh_1 42 70 IPR002048 GO:0005509
Tpr7g0152 1264 SMART efh_1 8 36 IPR002048 GO:0005509
Tpr7g0152 1264 MobiDBLite consensus disorder prediction 472 510 - -
Tpr7g0152 1264 MobiDBLite consensus disorder prediction 1242 1264 - -
Tpr7g0152 1264 MobiDBLite consensus disorder prediction 862 881 - -
Tpr7g0152 1264 PANTHER EH DOMAIN 1194 1264 - -
Tpr7g0152 1264 PANTHER EH DOMAIN 1 1132 - -
Tpr7g0152 1264 CDD EH 519 585 IPR000261 GO:0005515
Tpr7g0152 1264 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1194 1264 - -
Tpr7g0152 1264 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1 1132 - -
Tpr7g0152 1264 MobiDBLite consensus disorder prediction 627 646 - -
Tpr7g0152 1264 ProSiteProfiles EH domain profile. 5 95 IPR000261 GO:0005515
Tpr7g0152 1264 ProSiteProfiles EF-hand calcium-binding domain profile. 548 583 IPR002048 GO:0005509
Tpr7g0152 1264 CDD EH 9 75 IPR000261 GO:0005515
Tpr7g0152 1264 MobiDBLite consensus disorder prediction 412 439 - -
Tpr7g0152 1264 MobiDBLite consensus disorder prediction 908 939 - -
Tpr7g0152 1264 SMART eh_3 508 603 IPR000261 GO:0005515
Tpr7g0152 1264 SMART eh_3 1 93 IPR000261 GO:0005515
Tpr7g0152 1264 SUPERFAMILY EF-hand 5 83 IPR011992 -
Tpr7g0152 1264 MobiDBLite consensus disorder prediction 472 513 - -
Tpr7g0152 1264 SUPERFAMILY EF-hand 503 598 IPR011992 -
Tpr7g0152 1264 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Tpr7g0152 1264 Coils Coil 686 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0152 Tpr-Chr7 1218576 1229275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0152 4 187 EF-hand Containing Proteins AT1G20760 56.085 7.70e-51 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0152 K12472 - cam:101508239 1916.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0152 7 1218576 1229275 Tpr7g0152 7 1218576 1229275 ECH