Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0140 ATGAAGATGAAATTGAATCTGTTTTCGTTTCTCTTTACATTTACCATTCTATCCTCCCATGTCCTCTCCATTTCCGATCTCATCCTCACCAAGGTTGACCGTCGTATTGATCTGTCAACGCAAATTGTCCGCACCACTACTACACTAAAGGTAGAGAATGCAGGGTCTGATATTGTATCTGAAATCTTGCTGTCCTTTCCTGAAAACCATGCAATTCACTTGGCATATTTGTCGGCAACACTTAATGAAGGAAGGGGAAAGGCGAAACCATCTTCTGGTGTTAGTTTACCCTATGATGAAGTTGTCAGCCCTAAAGATTTTCCCAATTCCTTGAAAGTTTACTCTGTAACTTTACCTAAAGGCCTTGGGAAGGGAGATAGTCTGACGTTGGATGTCTTGGCAGTTTTCACCCACATATTGCAACCATTTCCAGAGAAAATTACTCAGGCTGATATTCAGCTTCTGCTTTTTCAAGAGAGTGCACACTATCTTACTCCTTATCCAGTAAAGGTTCAATCACTCACCGTTAAATTACCTGATGCAAGAATAGAGTCCTACTCAAAACTGGAAAATACAAAACTTCAGGGATCTGAATTGAAATATGGTCCATATCAGAATATTCCTCCATTTGCATACTTGCCAATGGTTATCCACTTTGAGAATAATCAGCCTTTTGCCGTTGCTAAAGAGTTGGTGAGGGAGATTGAGATATCCCATTGGGGTAATGTGCAGATCACAGAGCATTATAATCTCGTTCATGGCGGTGCTGAGAGCAAAGGAGAATTTTCTAGGCTTGACTATCAGGCCAGGCCGTATGTAAGAGGTGCATCAGCCTTTAGGCGTCTTGTTGCCAAGCTGCCACCAAGAGCTCATTCTGTGTACTACAGGGATGAAATCGGCAACATTTCCACTTCTAATTTGTGGGGTGACTCAAAAAAGACACAACTGGAGATCGAACCGAGGTACCCAATCTTTGGTGGCTGGAAAATTGCCTTTACCATTGGATATGGGTTGCCACTTCAGGACTTCTTATTTGGAATCGATGGAAAGCGCTTCCTTAATATCTCTTTTGGTTCCCCCATTAATGAGTTGGTGATTGACACTCTTATTGTGAAGGTTGTTTTGCCAGAGGGTTCAAAAGATATTTCACCATCTGTTCCATTTCCTGTGAAACAAAGACATGAGACAAAGTTTTCTCACTTGGATATTGCTGGTAGACCTGTTGTTGTGCTGGAGAAGAACAACGCTGTGCCTGAGCATAATGAGCATTTTCAGGTCTATTATAAGTTCAACCGTCTTTCTATGCTCAGGGAGCCATTGATGTTGATTTTTGGGTTTTTCTTTCTATTTGTTGCCTCCATTGTCTACATGCATGCAGACTTGTCAATCTCCAAGACTTCTGCATCTTATTTGGCAAAGATCCAATGGGAAGAGGTTCAAGCAACTATTCATCAGGTCCATACTATCATTAGCCGTTGCTTAACAACACATGACAAGCTAGAAGCATCATTGCGTGATCTTTCTAGGACAGGAGATATTCAAGCATGTAAAGCAACCCGGAAATCAGTTGATAGCTCGTTGAAAGAGCTCACGAAAGAGTTGAAATCGCCAGTGACATTCTTGCAGTCTTCACCACAAGCCACACAAATATTACCCAAGGTGGAGGAAGTTATTGCTAAGGAGAGAGATTTGCAGGAGAGACTCATGGCAAAACACTCTACTGTTGTTGACTGTTATGAGAAGAAGTTAGGAGGAAGGGAAATTGAGAATAGGGTTGCTTCACATCAGCAGAAAATTACAGCTCTGAGACAAGAGATTGACGATCTTATGGACTTGATCGATGAGATATGA 1851 0.4171 MKMKLNLFSFLFTFTILSSHVLSISDLILTKVDRRIDLSTQIVRTTTTLKVENAGSDIVSEILLSFPENHAIHLAYLSATLNEGRGKAKPSSGVSLPYDEVVSPKDFPNSLKVYSVTLPKGLGKGDSLTLDVLAVFTHILQPFPEKITQADIQLLLFQESAHYLTPYPVKVQSLTVKLPDARIESYSKLENTKLQGSELKYGPYQNIPPFAYLPMVIHFENNQPFAVAKELVREIEISHWGNVQITEHYNLVHGGAESKGEFSRLDYQARPYVRGASAFRRLVAKLPPRAHSVYYRDEIGNISTSNLWGDSKKTQLEIEPRYPIFGGWKIAFTIGYGLPLQDFLFGIDGKRFLNISFGSPINELVIDTLIVKVVLPEGSKDISPSVPFPVKQRHETKFSHLDIAGRPVVVLEKNNAVPEHNEHFQVYYKFNRLSMLREPLMLIFGFFFLFVASIVYMHADLSISKTSASYLAKIQWEEVQATIHQVHTIISRCLTTHDKLEASLRDLSRTGDIQACKATRKSVDSSLKELTKELKSPVTFLQSSPQATQILPKVEEVIAKERDLQERLMAKHSTVVDCYEKKLGGREIENRVASHQQKITALRQEIDDLMDLIDEI* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0140 616 Pfam Ribophorin I 29 456 IPR007676 GO:0006486|GO:0016021
Tpr7g0140 616 PANTHER RIBOPHORIN I 4 594 IPR007676 GO:0006486|GO:0016021
Tpr7g0140 616 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1 4 594 - -
Tpr7g0140 616 Coils Coil 585 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0140 Tpr-Chr7 1149317 1153902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0140 23 554 Miscellaneous Gene Families AT1G76400 66.541 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0140 K12666 - gmx:100817203 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0140 7 1149317 1153902 Tpr7g0140 7 1149317 1153902 ECH