LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g0136	ATGAAAGGTGCTGTTCTTGTTGCTATTGCTGCTTCCATCGGTAATTTTCTTCAAGGATGGGATAATGCTACCATTGCTGGTTCCATTCTTTATATTAAGAAAGACCTTGCTTTGCAAACAACTATGGAAGGACTTGTGGTGGCCATGTCACTTATTGGAGCTACCGTGATTACAACTTGCTCTGGTCCGATATCAGATTGGCTTGGTCGGAGACCGATGTTGATAATCTCATCCGTGCTATATTTCTTGGGAAGTTTGGTTATGTTGTGGTCTCCTAATGTATATGTCTTGTGTTTAGCGAGGCTGCTTGATGGATTTGGTATTGGTCTTGCTGTGACTCTTGTTCCGGTTTATATATCTGAGACTGCCCCGTCGGATATAAGGGGATCTTTAAATACACTGCCTCAGTTCAGCGGTTCTGGAGGCATGTTTTTATCGTACTGTATGGTTTTTGGGATGTCATTGACTGCCTCACCTAGCTGGAGAGTAATGCTTGGGGTTCTTGCAATTCCTTCTCTCTTCTATTTTATATTGACAATATTTTTCTTGCCTGAGTCTCCTCGGTGGCTCGTGAGTAAAGGAAGGATGTTGGAGGCTAAAAAGGTTCTCCAGAGATTACGTGGCCAGGATGATGTGTCTGGTGAGATGGCATTGCTGGTTGAAGGTCTCGGGATTGGAGGTGATGCATCTATTGAAGAGTACATAATAGGCCCAGATGACGACATAGCGGATGATCATGAACAAACGACAGATAGAGACAAAATCCGGTTATATGGATCTCAAGCAGGCCTCTCCCGGTTAGCAAAACCTGTAACTGGACAAAGTTCTCTTGGTCTTGGCCTTGTGTCACGCCATGGAAGCCTTGCCATGGATCCTCTTGTAACCTTATTTGGCAGCGTTCATGAGAAGCTGCACCCTGAGACAGGAAGCATGAGAAGTGCTTTGTTTCCGACTTTTGGAAGCATGTTCAGCACAGCTGATCCTCATATTAAAAATGAACATTGGGATGAAGAGAGCCTACAAAGAGAAGAGGAGGACTACATATCAGATGGGGCTGCTGGGGACTCCGATGACAATTTGCACAGTCCCTTAATCTCACGCCAAACAACAAGCCTTGAAAAAGACTTGCCTCCTCCTCCATCCCATGGCAGTTTGCTGAATAACATTAGGCGCCACAGTAGTCTCATGCATGAGTCAGGTGATCCAGTTGGTAGTACTGGTATTGGTGGTGGTTGGCAGCTTGCATGGAAATGGTCCGGTAAAGGTGAGGATGGAAAAAAGCAAGGAGAGTTTAAAAGGATTTATTTGCACGAGGAGGGAGTTTCTGGTACTCGACGTGGATCCATGGTATCAATTCCCGATGAAGGTGACTTTGTCCATGCAGCTGCCCTGGTTAGCCAACCTGCTCTTTACTCCAAGGAGCTAATTGGTGAACAACCAGTTGGGCCTGCAATGGTTCACCCATCTACGACTGCTTCGAAAGGGCCCATTTGGGAGGCTCTTCTTGAACCAGGGGTCAAGCATGCATTGGTTGTAGGTATTGGAATTCAACTTCTTCAGCAGTTTTCAGGGATTAATGGGGTTCTATATTACACTCCTCAAATCCTTGAAGAGGCCGGTGTTGCAGTTCTTCTTTCAGATTTGGGCCTTAGCTCAACGTCTTCATCTTTTCTTATAAGTGCTGTCACAACCTTGTTGATGCTTCCAAGTATAGGCATAGCTATGAGGCTTATGGATGTCACGGGTAGAAGGCAATTACTACTTGTCACAATTCCAGTGCTGATAGTGTCACTTGTTATATTGATCCTTGGAAGCGTAATAAATTTTGGCAGTGTTGTCCATGCAGCGATCTCAACTATATGCGTCATAGTATATTTTTGCTTCTTTGTTATGGGTTATGGACCAATTCCAAACATCCTTTGCGCAGAGATTTTCCCCACTAGAGTGCGTGGGCTCTGCATTGCTATCTGCGCCTTAGTGTTCTGGATTGGAGACATCATTGTCACGTACTCACTGCCTGTGATGCTCAGTACTTTAGGTCTAGCCGGTGTCTTCGCCGTTTATGCGGTTGTGTGTGTCATCTCTTTCATATTTGTGTATCTGAAGGTTCCAGAAACAAAGGGCATGCCTCTTGAAGTCATCACTGAATTCTTTGCTGTTGGTTCAAAGCAGGCTGCAGCCGCAAAGAACGAGTGA	2196	0.4522	MKGAVLVAIAASIGNFLQGWDNATIAGSILYIKKDLALQTTMEGLVVAMSLIGATVITTCSGPISDWLGRRPMLIISSVLYFLGSLVMLWSPNVYVLCLARLLDGFGIGLAVTLVPVYISETAPSDIRGSLNTLPQFSGSGGMFLSYCMVFGMSLTASPSWRVMLGVLAIPSLFYFILTIFFLPESPRWLVSKGRMLEAKKVLQRLRGQDDVSGEMALLVEGLGIGGDASIEEYIIGPDDDIADDHEQTTDRDKIRLYGSQAGLSRLAKPVTGQSSLGLGLVSRHGSLAMDPLVTLFGSVHEKLHPETGSMRSALFPTFGSMFSTADPHIKNEHWDEESLQREEEDYISDGAAGDSDDNLHSPLISRQTTSLEKDLPPPPSHGSLLNNIRRHSSLMHESGDPVGSTGIGGGWQLAWKWSGKGEDGKKQGEFKRIYLHEEGVSGTRRGSMVSIPDEGDFVHAAALVSQPALYSKELIGEQPVGPAMVHPSTTASKGPIWEALLEPGVKHALVVGIGIQLLQQFSGINGVLYYTPQILEEAGVAVLLSDLGLSSTSSSFLISAVTTLLMLPSIGIAMRLMDVTGRRQLLLVTIPVLIVSLVILILGSVINFGSVVHAAISTICVIVYFCFFVMGYGPIPNILCAEIFPTRVRGLCIAICALVFWIGDIIVTYSLPVMLSTLGLAGVFAVYAVVCVISFIFVYLKVPETKGMPLEVITEFFAVGSKQAAAAKNE*	732

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g0136	731	Pfam	Sugar (and other) transporter	497	718	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Tpr7g0136	731	Pfam	Sugar (and other) transporter	7	219	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Tpr7g0136	731	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	7	707	IPR020846	GO:0022857
	Tpr7g0136	731	PANTHER	-	1	728	-	-
	Tpr7g0136	731	Gene3D	MFS general substrate transporter like domains	2	261	IPR036259	-
	Tpr7g0136	731	ProSitePatterns	Sugar transport proteins signature 1.	61	78	IPR005829	GO:0016021\|GO:0022857\|GO:0055085
	Tpr7g0136	731	PRINTS	Sugar transporter signature	15	25	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Tpr7g0136	731	PRINTS	Sugar transporter signature	98	117	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Tpr7g0136	731	PRINTS	Sugar transporter signature	520	530	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Tpr7g0136	731	PRINTS	Sugar transporter signature	619	640	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Tpr7g0136	731	PRINTS	Sugar transporter signature	642	654	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Tpr7g0136	731	Coils	Coil	723	731	-	-
	Tpr7g0136	731	CDD	MFS_GLUT_like	10	191	-	-
	Tpr7g0136	731	SUPERFAMILY	MFS general substrate transporter	5	712	IPR036259	-
	Tpr7g0136	731	ProSitePatterns	Sugar transport proteins signature 2.	103	128	IPR005829	GO:0016021\|GO:0022857\|GO:0055085
	Tpr7g0136	731	CDD	MFS_GLUT_like	508	705	-	-
	Tpr7g0136	731	PANTHER	MONOSACCHARIDE-SENSING PROTEIN 1	1	728	-	-
	Tpr7g0136	731	Gene3D	MFS general substrate transporter like domains	491	729	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g0136	Tpr-Chr7	1110653	1116695	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr7g0136	1	731	Organic Solute Cotransporters	AT4G35300	67.828	0.0	946

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g0136	-		-	gmx:100791976	1208.74

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr7g0136	7	1110653	1116695	Tpr7g0136	7	1110653	1116695	ECH