LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g0133	ATGGCTTTTTTCTCCTCCAAAACACTTGTCCTGACCTGCTCCTTATGCCTATTTCTATCTCTAGCTTTTGGACGCGATTTCTCCATCGTGGGCTATTCATCGGAGGACTTAAAGTCCATGGATAAGCTTATTGAACTCTTCGAATCATGGATGTCGAGACATGGTAAGATTTACGAGACCATTGAGGAAAAACTACTTAGGTTCGAGGTGTTTAAGGATAATCTAAAACACATTGATGATAGAAACAAGATTGTTAGCAACTATTGGCTTGGTCTAAATGAGTTTGCTGATTTGAGCCACCAAGAGTTCAAGAACAAGTATCTTGGATTAAAGGTTGACTTATCTCAAAGGAGAGAAACCTCAAATGAAGAGGAATTCACTTATAGAGATGTTGATTTGCCTAAGTCAGTTGATTGGAGAAAAAAAGGTGCCGTCACCCCTGTCAAGAATCAAGGCCAATGTGGTAGTTGCTGGGCATTTTCAACGGTTGCGGCGGTTGAAGGAATAAATCAAATTGTAACAGGAAATTTGACATCTTTGTCCGAGCAAGAGTTAATCGATTGTGACACAACTTATAACAATGGTTGCAATGGAGGTCTAATGGACTATGCATTCTCCTTCATTGTACAAAATGGCGGACTCCATAAAGAGGAAGATTATCCTTACATTATGGAGGAAAGCACTTGTGAAATGAAAAAGGAAGAAACCCAAGTTGTCACTATTAATGGGTACCATGATGTGCCACAAAATAATGAACAAAGCTTATTGAAGGCACTTGCCAATCAACCCCTTAGTGTGGCCATTGAGGCTTCAAGCAGAGATTTTCAATTTTATAGCGGAGGTGTGTTTGATGGGCATTGTGGAAGTGATCTAGATCATGGTGTGTCAGCCGTTGGATATGGTACATCAAAGAATTTGGATTACATCATAGTGAAGAATTCATGGGGGGCAAAATGGGGAGAGAAAGGTTTTATAAGGATGAAGAGAAACATTGGAAAGCCTGAAGGGATTTGTGGACTCTACAAGATGGCTTCTTATCCTACTAAGAAGAAATAA	1056	0.3977	MAFFSSKTLVLTCSLCLFLSLAFGRDFSIVGYSSEDLKSMDKLIELFESWMSRHGKIYETIEEKLLRFEVFKDNLKHIDDRNKIVSNYWLGLNEFADLSHQEFKNKYLGLKVDLSQRRETSNEEEFTYRDVDLPKSVDWRKKGAVTPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDTTYNNGCNGGLMDYAFSFIVQNGGLHKEEDYPYIMEESTCEMKKEETQVVTINGYHDVPQNNEQSLLKALANQPLSVAIEASSRDFQFYSGGVFDGHCGSDLDHGVSAVGYGTSKNLDYIIVKNSWGAKWGEKGFIRMKRNIGKPEGICGLYKMASYPTKKK*	352

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g0133	351	ProSitePatterns	Eukaryotic thiol (cysteine) proteases cysteine active site.	151	162	IPR000169	-
	Tpr7g0133	351	Gene3D	Cysteine proteinases	26	350	-	-
	Tpr7g0133	351	ProSitePatterns	Eukaryotic thiol (cysteine) proteases asparagine active site.	308	327	IPR025661	-
	Tpr7g0133	351	SMART	pept_c1	133	348	IPR000668	GO:0006508\|GO:0008234
	Tpr7g0133	351	SUPERFAMILY	Cysteine proteinases	42	348	IPR038765	-
	Tpr7g0133	351	CDD	Peptidase_C1A	134	347	IPR039417	-
	Tpr7g0133	351	PANTHER	CYSTEINE PROTEASE FAMILY C1-RELATED	24	349	-	-
	Tpr7g0133	351	SMART	Inhibitor_I29_2	47	103	IPR013201	-
	Tpr7g0133	351	Pfam	Papain family cysteine protease	133	347	IPR000668	GO:0006508\|GO:0008234
	Tpr7g0133	351	PRINTS	Papain cysteine protease (C1) family signature	151	166	IPR000668	GO:0006508\|GO:0008234
	Tpr7g0133	351	PRINTS	Papain cysteine protease (C1) family signature	293	303	IPR000668	GO:0006508\|GO:0008234
	Tpr7g0133	351	PRINTS	Papain cysteine protease (C1) family signature	308	314	IPR000668	GO:0006508\|GO:0008234
	Tpr7g0133	351	PANTHER	-	24	349	-	-
	Tpr7g0133	351	Pfam	Cathepsin propeptide inhibitor domain (I29)	47	103	IPR013201	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g0133	Tpr-Chr7	1086620	1088433	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g0133	K16290		-	gmx:100788466	659.062

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr7g0133	7	1086620	1088433	Tpr7g0133	7	1086620	1088433	ECH