Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0130 ATGGCGACATCAACCCCAGAAAGACCCGCCGAACCACCGTCATCCGCCGCCGAACCACCTAAAATTCAAACTCAACCTCCAATTTCTACTCCACCTCCACCTCCTGCGAAGCCACCACTAACACCACCGCCGTCGAAACCAGAAGTCCCACTGGCAGACCCCAAACCATCTCCCGACACCAGCTTAATCCTAATCCCAAGTCACTCAAGATGGTTCTCATGGGATTCCATTCACGAATGCGAGATTCGTAACATTCCAGATTCTTCCAAAAACCCTAGGGTTTACAAATACTATAGAAATTCTATAGTAAAACATTTCAGATTCAATCCCAATAGAAAAATCACCTTCACCGATGTTCGGAAAACGCTCGTAGGTGACGTAGGTTCAATTCGAAGAGTCTTCGATTTTCTTGAAGCTTGGGGTTTAATCAATTATCATCCTTCTTCTTCTCTCAGTAAACCTTTCAAATGGGATGACAAAGACTCAAAACCTGAATCAGGATCGAATTCTACTGATTCTTCTTCTCCGGCGCCGGTCAAAGAAACTGCTAGGAGAATTTGCAGTGGCTGCAAAACTAACTGTGTTGTTGCTTGCTTTGCCTGTGACAAGGTTAGTTATTTTTGGTATTCTGAAAAGAATGATATGACTTTGTGTGCGAGGTGTTTTGTTCGCGGAAACTATCGAATTGGTATGAGTAATACAGAATTCAAGAGAGTGGAGATTAGTGAGGCGACAAAAACTGAATGGACTGAGAAGGAAACGTTGAATCTTCTTGAAGCTATTACGTTTTTCGGTGATGATTGGAAGAAGGTTTCTCATCATGTTGTTGGTAGGACTGAGAAGGAATGTGTTGCTCGTTTTCTTAAGCTTCCTTTTGGTGATCAATTCCTGCGTTATCAACAGTCTGAGTCTGCTTCTCTCACTGATGACGGTTCTCATCAGTTGAAGCCTCCTGCTGATGCTGAATTTGAGTCAGAAACTGTTGACTCGGATAAATCTAGTAAGAGAATGCGTCTCACACCTCTTGCGGATGCAAGCAATCCTATCATGGCTCAGGCTGCTTTCCTTTCTGCTTTAGCAGGGACTGAGGTTGCACATGCTGCGGCTCAAGCTGCTCTGACAACTCTGACCGATGTTTACAAGTCAACTAGAACTAACTATCGACCATTTCAGAAGAATGCATTACCACAAGATGTTGGTGTTGCATCCAACGGTGGTAATGCTTCAGATTCTATCCAAGGATCTCTATTGCGTGCTGATTTACAGTGCGAGAAGGAAGAATCAGATGTGGCAAAATCAATTTCTGAGATTATAGAAGTTCAGATGAAAACTATCCAGGACAAGCTTATCAAGTTTGAAGAGTTAGACCTGCTAATGGAAAAAGAATCCCAGCAGTTGGAGCAAGTGAAGAGTTTGTTTTTCCTTGATCAGCTTAACCTTTTATTTCGTAAAACATCTGCACCAACGACCGCAGAAGGCAATCATGTAAAGAGGAATTGA 1500 0.4293 MATSTPERPAEPPSSAAEPPKIQTQPPISTPPPPPAKPPLTPPPSKPEVPLADPKPSPDTSLILIPSHSRWFSWDSIHECEIRNIPDSSKNPRVYKYYRNSIVKHFRFNPNRKITFTDVRKTLVGDVGSIRRVFDFLEAWGLINYHPSSSLSKPFKWDDKDSKPESGSNSTDSSSPAPVKETARRICSGCKTNCVVACFACDKVSYFWYSEKNDMTLCARCFVRGNYRIGMSNTEFKRVEISEATKTEWTEKETLNLLEAITFFGDDWKKVSHHVVGRTEKECVARFLKLPFGDQFLRYQQSESASLTDDGSHQLKPPADAEFESETVDSDKSSKRMRLTPLADASNPIMAQAAFLSALAGTEVAHAAAQAALTTLTDVYKSTRTNYRPFQKNALPQDVGVASNGGNASDSIQGSLLRADLQCEKEESDVAKSISEIIEVQMKTIQDKLIKFEELDLLMEKESQQLEQVKSLFFLDQLNLLFRKTSAPTTAEGNHVKRN* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0130 499 Gene3D - 69 149 IPR036388 -
Tpr7g0130 499 ProSiteProfiles SANT domain profile. 244 295 IPR017884 -
Tpr7g0130 499 CDD SANT 248 290 IPR001005 -
Tpr7g0130 499 MobiDBLite consensus disorder prediction 1 57 - -
Tpr7g0130 499 MobiDBLite consensus disorder prediction 305 336 - -
Tpr7g0130 499 SUPERFAMILY Homeodomain-like 60 154 IPR009057 -
Tpr7g0130 499 Gene3D - 244 294 - -
Tpr7g0130 499 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 246 283 IPR017930 -
Tpr7g0130 499 Pfam Myb-like DNA-binding domain 247 290 IPR001005 -
Tpr7g0130 499 Pfam SWIRM-associated region 1 418 481 IPR032451 -
Tpr7g0130 499 MobiDBLite consensus disorder prediction 12 54 - -
Tpr7g0130 499 Pfam SWIRM domain 66 145 IPR007526 GO:0005515
Tpr7g0130 499 ProSiteProfiles Myb-like domain profile. 241 291 IPR001005 -
Tpr7g0130 499 PANTHER SWI/SNF COMPLEX-RELATED 1 493 - -
Tpr7g0130 499 SMART sant 245 293 IPR001005 -
Tpr7g0130 499 MobiDBLite consensus disorder prediction 315 336 - -
Tpr7g0130 499 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3B 1 493 - -
Tpr7g0130 499 Coils Coil 452 472 - -
Tpr7g0130 499 ProSiteProfiles SWIRM domain profile. 63 154 IPR007526 GO:0005515
Tpr7g0130 499 SUPERFAMILY Homeodomain-like 245 296 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0130 Tpr-Chr7 1041586 1044671 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0130 K11649 - gmx:100779777 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0130 7 1041586 1044671 Tpr7g0130 7 1041586 1044671 ECH