Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0032 ATGGCAATTGAAGGTTATTTTCATCCATATTTTGGTCACGTCAATCAAAATAGGTCCTTTCCTGATTCTAATTCTAATGTGTACGCCACTGTCAACTATAACAATGTTGAGCTTGAGACCTTTCATCAACAGAAGGACGAGGTTGATCACTTTTTAAGATCACAGAATGAGAAATTGAGAATATTTGTGCAAGAGCAGAGAAAGCAACAAGTTGAGACGTTATTGAAGAAGATAGAGTTGGATGTTTTTTCTATGCTAAAACAAAAGGATGAACAAATAGCACAAGCAACTAAGAGAAGATTGGAGTTGGAAGAATTGTTGGCAAGGCTAGAGATAGAGAATCAAACATGGCAGAGAGCTGCTCATGAAAATGAAGCCATGGTGTTGTCTCTCCAAAATGCCTTAGAACAACAGATGAAAGAAAGAGCTTCCTATTGTTACAACAATGATGATGCAGAGTCGTGTTGTGACAACAAAAATCATCAAGAAGAAACAGGGGAAAACAGAGTATGTGGTGATGAACAAATTACAAGTGTTAATAACATGATGATTTGCAAATGTTGTCGTTCACGGGAGTCGAGTTTTATGTTCCTTCCTTGCAGGCACCTTTGTTCGTGCAAAGCGTGTGAGCCTTCTCTCCAAGCATGTCCTGTGTGCTTAATGCAAAAGAGATCTATTATAGAGACTCTCATTTTCTAA 699 0.3805 MAIEGYFHPYFGHVNQNRSFPDSNSNVYATVNYNNVELETFHQQKDEVDHFLRSQNEKLRIFVQEQRKQQVETLLKKIELDVFSMLKQKDEQIAQATKRRLELEELLARLEIENQTWQRAAHENEAMVLSLQNALEQQMKERASYCYNNDDAESCCDNKNHQEETGENRVCGDEQITSVNNMMICKCCRSRESSFMFLPCRHLCSCKACEPSLQACPVCLMQKRSIIETLIF* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0032 232 PIRSF SBP1_RNase_bind 14 232 IPR017066 -
Tpr7g0032 232 Pfam Zinc finger, C3HC4 type (RING finger) 184 222 - -
Tpr7g0032 232 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 15 231 - -
Tpr7g0032 232 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 15 231 IPR017066 -
Tpr7g0032 232 ProSiteProfiles Zinc finger RING-type profile. 185 219 IPR001841 -
Tpr7g0032 232 Gene3D - 194 222 - -
Tpr7g0032 232 Gene3D - 38 76 - -
Tpr7g0032 232 Gene3D Death Domain, Fas 77 193 IPR011029 -
Tpr7g0032 232 Coils Coil 86 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0032 Tpr-Chr7 277093 278942 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0032 181 219 Miscellaneous Gene Families AT4G39050 43.590 1.59e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0032 K19042 - gmx:100815248 231.106