Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0029 ATGGACGCTGCTAACAACCGTAATTGTGCAAATGCTTCAAATCCTTACCATCAATGCACACAAGCTTGCTCCCAAAAAGGAACAAAGCCACACCACACTGCTACTACTACTAATGCCCGAAAGACTATTACTACTACTGCTTCTAATGGCCGAAGAAGCAACAACATAGCAACAACAACAACAAATGGTGAAAGACAATCAACAGTAGTTGCAGGTTGTGCTAAAGCATCTAATCCTTATCATAAGTGTGATGCCAATTGCAACAAAACTTCTTCATCCAATTCAGGTGCCACTCCTCATTCCAAGATTGATCATAGGCAAAAAAGGCCAGGTTCTAAGCCAGTACCTCCTGTTCTTAACAGTGTTCCAGCAACAAATAATATCTCCAATGCTTCATCTACAAAACAAAATTATTCTGAGAACAAAAAGAAGATAGACCAAAAAAACAATGTGATCATTCCTTCTTCTGGACCAATTTCTGGTCAATTACACATCCCAGATGTTGAGGCTAAAGACAAAGTTAAGGATGGCGTTACTGAGGCCGTCTCCAATCAGAAAGAAACAAATAAAGAGGACAAAATTACTTCTTCTGATGAAATTGTTGCAGTCACCAATTCTGATGAAACTAGTAAAGGTGGTTCCAAAGATTTTAGTTTCTCGGGCACTCCCCTTCCCGGTCACAAGAAAGACGTAGATTCTAGCAGTGAAGATGAAGCAGATAGTGTGAGTGTGATATCTGAATCCCGTATTTCAATTGGAAAGTACAATGTCAAAGAAAGTTTTGGTAACATCCTGCAAACAATACTTGATAAGTATGGGGATATAGGTGCAAGCTGTGATTTGGAATCAGTTGTAATGCGTTCCTATTACATGGAATGTGTATGTTTTGTGGTCCAAGAATTACAATCTTCTTCTGATTCAATAAGTAAGTCTAAAGTGAATGAATTGTTGGATATTGTTAAGGATGTTGAATCCGCTCATCTTCGTGTAGCATGGCTGCGTAACGCACTTGATGAAATAGTTGAAAATATTGAACTGATTAATCAGCAGCAGGATATGGAGAATGAAAAGGCAAACTATGATCGTGAAATCGAATCATTGAAAGAACAGCTAGAATTGAATTTGGAAACATTGGCTCAGAAAGAACAAGAGGTTGCTGAAATTAATACAAGAATTCCTGAAATCAGAGATCGTTTGAGCAAGCTTGAGCAGCTCGTGTCTTCTGCATTAGTCGATTGTCAAACCACGCTACCTATCAAGAGCAAGATAGATCAACTATTATAA 1284 0.384 MDAANNRNCANASNPYHQCTQACSQKGTKPHHTATTTNARKTITTTASNGRRSNNIATTTTNGERQSTVVAGCAKASNPYHKCDANCNKTSSSNSGATPHSKIDHRQKRPGSKPVPPVLNSVPATNNISNASSTKQNYSENKKKIDQKNNVIIPSSGPISGQLHIPDVEAKDKVKDGVTEAVSNQKETNKEDKITSSDEIVAVTNSDETSKGGSKDFSFSGTPLPGHKKDVDSSSEDEADSVSVISESRISIGKYNVKESFGNILQTILDKYGDIGASCDLESVVMRSYYMECVCFVVQELQSSSDSISKSKVNELLDIVKDVESAHLRVAWLRNALDEIVENIELINQQQDMENEKANYDREIESLKEQLELNLETLAQKEQEVAEINTRIPEIRDRLSKLEQLVSSALVDCQTTLPIKSKIDQLL* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0029 427 PANTHER BNAA07G03350D PROTEIN 6 426 - -
Tpr7g0029 427 MobiDBLite consensus disorder prediction 90 240 - -
Tpr7g0029 427 MobiDBLite consensus disorder prediction 119 138 - -
Tpr7g0029 427 PANTHER OS06G0711100 PROTEIN 6 426 - -
Tpr7g0029 427 MobiDBLite consensus disorder prediction 26 63 - -
Tpr7g0029 427 MobiDBLite consensus disorder prediction 198 217 - -
Tpr7g0029 427 Coils Coil 343 405 - -
Tpr7g0029 427 MobiDBLite consensus disorder prediction 166 197 - -
Tpr7g0029 427 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 110 IPR013087 -
Tpr7g0029 427 Pfam Arabidopsis phospholipase-like protein (PEARLI 4) 218 404 IPR007942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0029 Tpr-Chr7 255726 258370 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0029 - - mtr:MTR_3g118020 516.538