Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0018 ATGACGATCCATTCTGTAGTGATACAGAAACTGCTTAGCACCAATGCCCACATTGGCCGTCAAGTCGCCACTCATCATTTCAAAGAATACACTTACGGCCTCCGCAACAAAATGGCCATTATCGATTCCGATAAGACCTTGATTTGCATGCGTAGTGCCTTCAATTTCATCTCTTGCCTTGCCCGCCAAAACGGACGCTTCATGTTCATCAACACCAACCCTCTCTTCGATGAAATCTTTGACCTTATGACCAAAAAAGTCGGCTGCTACAGCCCTTCTTCCAGTTCTCTCTGGCGCACCGGCGGATTCCTCACCAACAGCAACAGTCCCAAAAAGTTTCGCTCTCGCAACAAGAAGCTCTGCTTCGGTCCCACTCAGCCTCCCGATTGCATTGTCATTGTCGACACTGAGAGCAAGTCTTCTGTCATTGACGAGGCTTTCAAACTTCAGATTCCAATTGTAGCTCTCGTCGATTCTGCCATGCCACTCCATACTTTTAGCCGCATTGCTTATCCAATTCCTGTTAACCCGTCTGTTCAATTTGTCTATCTCTTCTGTAATTTGATTACCAAAACACTGCTTCTTGAGAAGAAGAACTTGCAGCTCTCTAATCCCAAAATTGATGATCGAGAAGAAGCTACCAAAATTGAAGATAACAAGCGGAAGAATAATCTGGCTAAGGTTGGCATCACTGTTATGCCCTACGATAAATTGGCACCCTTGCCCGAAGATATAGAAGATACGAAGAAACTTTTGGACAAGCTTGTTATTTTGAAGGTCAATCACGACTCCGGAAGAAATATGGATTTTGAAAACCCTAAATCCACAATAGATATTTGTGATGGACAGACATTTCTAGACATGATTGTTAACCAGATTGAGACCCTCAACTCCAAGTATGGATGCCAAGTTCCATTGCTTATTTTTGACAAAGATGACACTCACGATAGTACTTTAAAGGTTTTGGAAAAGTATTCGGAATCAAGCGTTGATGTGCGCACTTTTAAGCAGGGTGAAGATCCAGAGCTAACATTTGGTGGGCATCGCAGCAAGGAGGAAGTGCATACATTTGACGACGGTGATATATTCCGTTCACTAATGATAGGCGGAACCCTTGATTTATTATTATCACAGGGAAAGGAGTATATCCTTGTGATGAAGTCAGACAATGTGGCTACAATCGTTGATCCAAATATAATAAATCATTTGATGATAAATGCTATTGATTATTGCATGGAGGTGACACCAAGCCATTCATCTAATTTGATCTTAACTCCAATGAATTTTAAGCTTCAGGAGATTGCTCGAAACCAAGATAAACATTTGAAAGACAAATTCAAACTCATTGATACAACAAACATGTGGGTGAGTTTAAGAGCCATTAAGAGACTAATTGATACTAATAGACTAAAGCCCAAGAAGCCCTCAATTTCGAAGGAGAATGACTATGATCAAACTCTTCTGCAAGAAACCAATGCTGGACCGGGAGTACAGTTCTTTGATAATGTAATCGGTGTCTCAACGCCTGAATCTCGTTTTCTTCCCTTTGACGCAACATCGGATTTACTTCTTCTACAGTCAGATCTATATACTTGTAGGGCAGGTGTTTTATCTCGTAATCCTGCTAGATCCAACCCTTTAAATCCTGTGATTGACATGGGACCAGAATTTGAAAAGATTGGTGATTTCCAAAGTCGGTTCAAATCCATTCCTAGTATCATCGGGTTGGATAGTTTGACGGTGAGAGGTGATGTGTGGTTTGGAGCTAATATTACTTTAAAGGGACACGTGACTATTGCTGCAAAAGCTGGCTTGAAATTGGAAATTCCAGATGGGGTTGTAATTGAGAATAAGGAGATTAATGACCCTGCAGATATCCAAAAATGA 1887 0.4123 MTIHSVVIQKLLSTNAHIGRQVATHHFKEYTYGLRNKMAIIDSDKTLICMRSAFNFISCLARQNGRFMFINTNPLFDEIFDLMTKKVGCYSPSSSSLWRTGGFLTNSNSPKKFRSRNKKLCFGPTQPPDCIVIVDTESKSSVIDEAFKLQIPIVALVDSAMPLHTFSRIAYPIPVNPSVQFVYLFCNLITKTLLLEKKNLQLSNPKIDDREEATKIEDNKRKNNLAKVGITVMPYDKLAPLPEDIEDTKKLLDKLVILKVNHDSGRNMDFENPKSTIDICDGQTFLDMIVNQIETLNSKYGCQVPLLIFDKDDTHDSTLKVLEKYSESSVDVRTFKQGEDPELTFGGHRSKEEVHTFDDGDIFRSLMIGGTLDLLLSQGKEYILVMKSDNVATIVDPNIINHLMINAIDYCMEVTPSHSSNLILTPMNFKLQEIARNQDKHLKDKFKLIDTTNMWVSLRAIKRLIDTNRLKPKKPSISKENDYDQTLLQETNAGPGVQFFDNVIGVSTPESRFLPFDATSDLLLLQSDLYTCRAGVLSRNPARSNPLNPVIDMGPEFEKIGDFQSRFKSIPSIIGLDSLTVRGDVWFGANITLKGHVTIAAKAGLKLEIPDGVVIENKEINDPADIQK* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0018 628 Gene3D Hexapeptide repeat proteins 517 626 - -
Tpr7g0018 628 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 196 516 IPR029044 -
Tpr7g0018 628 CDD RPS2 11 194 IPR001865 GO:0003735|GO:0005840|GO:0006412
Tpr7g0018 628 Pfam UTP--glucose-1-phosphate uridylyltransferase 209 594 IPR002618 GO:0070569
Tpr7g0018 628 PANTHER - 1 626 IPR016267 GO:0003983|GO:0006011
Tpr7g0018 628 SUPERFAMILY Ribosomal protein S2 8 200 IPR023591 -
Tpr7g0018 628 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 603 IPR029044 -
Tpr7g0018 628 PANTHER UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 1 626 - -
Tpr7g0018 628 ProSitePatterns Ribosomal protein S2 signature 1. 8 19 IPR018130 GO:0003735|GO:0005840|GO:0006412
Tpr7g0018 628 Pfam Ribosomal protein S2 126 192 IPR001865 GO:0003735|GO:0005840|GO:0006412
Tpr7g0018 628 Pfam Ribosomal protein S2 11 111 IPR001865 GO:0003735|GO:0005840|GO:0006412
Tpr7g0018 628 PRINTS Ribosomal protein S2 signature 8 26 IPR001865 GO:0003735|GO:0005840|GO:0006412
Tpr7g0018 628 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Tpr7g0018 628 PRINTS Ribosomal protein S2 signature 145 156 IPR001865 GO:0003735|GO:0005840|GO:0006412
Tpr7g0018 628 Gene3D - 2 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0018 Tpr-Chr7 169182 179716 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0018 K00963 - gmx:100812583 941.028