Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0017 ATGGCAGCGTTCTCTTCCATTTCTTCTTCGCCATTCTCATTATCAATACCCTCCTCATCCCGTTCAACTTCACTTTCATTCTCATTATCTTCTTCTTCTTCTTCTCAATTTCTGAAATTGCCACAACAACAACATACAAAAAAAAGAAGAGGGATGGTGGTGATGATGAGCTTGGAAGCAGGTGTTGGAGTCATGGCTACCAAATTGGGAATGATGAGCTTTTTCGAACCTAGTGGTGAGGTTGTTCCTGTCACCGTTGTCGGTTTCAAAGAAGGCAACATCGTCACTCAGATCAAAACTGACGCCACCGACGGTTACAACGCCGTCCAAGTTGGTTACCGTAGGGTTAGGGACCGCAAATTAACCAAACCCGAAATGGGTCATCTTGAAAAGGCGGGTGCCATTCCCATGCGCCATCTTCAGGAGTTTCGTCTTCAAAGCGTTGAAGGTTTTCAAGTTAATCAGCGCCTTGTTTTTGATGAACTTTTCAACGAGGGTGATCTTGTTGATGTCTCCGGCACCACTATCGGCAAGGGTTTCCAAGGTGGTATCAAGCGTTATAACTTCAAAAGGGGTCCAATGAGCCATGGTTCCAAGAGTCATAGACAGCTGGGATCAATTGGTGCCGGAACTACGCCTGGACGTGTATACAAGGGAAAGAAGATGCCTGGTAGGATGGGTGGAACCAATAGGAAGACCAGAAAGCTTAAGATTGTTAAAATTGATAAAGATCTTAATGTTATCATGATCAAAGGTGCTCTTCCTGGTAAGCCTGGGAATCTTCTGCGGATAGCTCCCGCCAAGATAGTTGGCAAGAACATTCCAAAGAATTAG 834 0.4496 MAAFSSISSSPFSLSIPSSSRSTSLSFSLSSSSSSQFLKLPQQQHTKKRRGMVVMMSLEAGVGVMATKLGMMSFFEPSGEVVPVTVVGFKEGNIVTQIKTDATDGYNAVQVGYRRVRDRKLTKPEMGHLEKAGAIPMRHLQEFRLQSVEGFQVNQRLVFDELFNEGDLVDVSGTTIGKGFQGGIKRYNFKRGPMSHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTNRKTRKLKIVKIDKDLNVIMIKGALPGKPGNLLRIAPAKIVGKNIPKN* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0017 277 Gene3D - 94 154 - -
Tpr7g0017 277 PANTHER 50S RIBOSOMAL PROTEIN L3 56 276 IPR019927 GO:0003735|GO:0005840|GO:0006412
Tpr7g0017 277 TIGRFAM L3_bact: 50S ribosomal protein uL3 63 264 IPR019927 GO:0003735|GO:0005840|GO:0006412
Tpr7g0017 277 SUPERFAMILY Translation proteins 61 273 IPR009000 -
Tpr7g0017 277 PANTHER 50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC 56 276 - -
Tpr7g0017 277 Gene3D Translation factors 189 269 - -
Tpr7g0017 277 ProSitePatterns Ribosomal protein L3 signature. 163 186 IPR019926 -
Tpr7g0017 277 Hamap 50S ribosomal protein L3 [rplC]. 61 268 IPR019927 GO:0003735|GO:0005840|GO:0006412
Tpr7g0017 277 Pfam Ribosomal protein L3 155 243 IPR000597 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0017 Tpr-Chr7 166944 168179 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0017 K02906 - zju:107423329 415.616