Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0008 ATGAGAATGAACGAAACGGATGAGAAGAGGGCAGCAGTACTACGGGAATGGTTCGATCGAGTTGACTCAGACAAAAGTGGAAGCATAACCGCGCTCCAACTCAAGACAGCTTTAGCTGTGGGAAACCTTGAATTTTCCCTCTCAGTGGTTCAGCAGATGATCAGGATGTACGATTTTGACAGGAATGGTACCATGAGTTTTCAAGAATTTGTTGCCCTCAACAACTTCCTTCTCAAGGTTCAACATGCATTTTCTGATCTAGAAAGGGGTCGTGGTTTTCTTTTGCCTGATGACGTGTTTGAGGCTTTGGTGAAAATTGGTTTCATGCTGGATTCTCCTGCTTTTTACTCTGTCTGCGAGAGCTTTGATCAAAGTAAAAATGGGAGGTTTCGGCTGGATGACTTCATATCACTCTGTATATTCTTACAATCAGCTCGGAATCTATTTAATTCATTTGATACTGCAAAACAAGGCAGAGTTACTCTTGATCTGAATCAATTTGTCTATTGTAATGCCAACTGTAGGATATGA 531 0.4143 MRMNETDEKRAAVLREWFDRVDSDKSGSITALQLKTALAVGNLEFSLSVVQQMIRMYDFDRNGTMSFQEFVALNNFLLKVQHAFSDLERGRGFLLPDDVFEALVKIGFMLDSPAFYSVCESFDQSKNGRFRLDDFISLCIFLQSARNLFNSFDTAKQGRVTLDLNQFVYCNANCRI* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0008 176 PANTHER PEFLIN 7 171 - -
Tpr7g0008 176 PANTHER PEFLIN 7 171 - -
Tpr7g0008 176 ProSiteProfiles EF-hand calcium-binding domain profile. 9 44 IPR002048 GO:0005509
Tpr7g0008 176 SUPERFAMILY EF-hand 7 170 IPR011992 -
Tpr7g0008 176 SMART efh_1 13 41 IPR002048 GO:0005509
Tpr7g0008 176 SMART efh_1 49 77 IPR002048 GO:0005509
Tpr7g0008 176 ProSiteProfiles EF-hand calcium-binding domain profile. 45 80 IPR002048 GO:0005509
Tpr7g0008 176 Pfam EF-hand domain pair 13 72 IPR002048 GO:0005509
Tpr7g0008 176 CDD EFh_PEF_ALG-2_like 13 174 - -
Tpr7g0008 176 ProSitePatterns EF-hand calcium-binding domain. 58 70 IPR018247 -
Tpr7g0008 176 Gene3D - 1 173 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0008 8 138 EF-hand Containing Proteins AT5G04870 27.536 1.10e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0008 - - gmx:100814189 317.39