Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0006 ATGGCGAGAGTTTTCTGTGATTTTCGGTTACTTCTCTTAGTTGCAGCCGTGGTCTTCATCTACATCCAGATTGAAGCTGAAAATCACTGTACAAGTCATATGCGATCACTGATTGATCAGATTAGTTTGCAGCAAGGCCGCATTGTCGCCCTAGAAGACGAAAGGAAGCTTCGAGACCAAGAATGTGGGCAAATGAAGTCTCGTGTTCAAGATCTTGAAAGAAAAGACGTACGGAGGCTGATCGATAAAGTGCAGGTTCCAGTGGCAGCTGTTGTGATCATGGCATGTAATCGTGCTGATTACCTGGAAAGGACTATCAATTCTGTATTGAAATACCAAAGGGACATTTCTTCAAGATTTCCTTTATTTGTATCTCAGGATGGATCAAATTCAGACGTCAAAAGTAAGGCTTTGAGCCATGATGAACTATCATATATGCAGCACTTAGATTTTGAGTCGGTTCAAACTGAAAGGCCAGGAGAGTTAATTGCTTACTACAAGATTGCACGTCATTACAAGTGGGCTCTAGGCCAACTGTTCGACAAGCATAACTTCAGTCGAGTCATCATTCTTGAAGATGACATGGAAATAGCACCTGATTTCTTTGATTACTTTGAAGCTATGGCAACTCTCCTTGACAAGGATAAGTCCATTATGGCTGTTTCGTCATGGAATGACAATGGACAGAGGCAGTTTGTACATGATCCATACGAACTTTATCGCTCAGACTTCTTTCCTGGACTAGGATGGATGCTGACTAGATCTACATGGGATGAACTATCACCAAAGTGGCCAAAGGCCTACTGGGATGATTGGTTGAGATTAAAAGAGAATCACAAAGGACGCCAGTTTATCCGACCCGAAGTATGCAGAACATATAATTTTGGAGAACATGGTTCTAGTTTGGGACAGTTTTTTAAGCAGTATCTTGAGCCAATCAAGCTGAATGAGGTCCAGGTCGACTGGAAGTCAATTGACTTGAGCTATTTGTTGGAGGACAAATATGCTATACACTTTGCCAACAATATTAAAAAAGCTAAACCTGTCTCTGGAGCAGACATTGTTCAAAAGGCACACAATATAGACGGTGATGTGCGTATAAAGTATAAAGATCAGTGGGACTTTGAAAACATTGCTCAACAATTCGGTATATTTCAAGAGTGGAAGGATGGTGTGCCTAGGGCAGCTTATAAAGGAGTAGTCGTTTTCAGATATCAAACCACAAGGCGTATATTCCTTGTTGGTCCAGAATCTTTGAAGCTACTTCAGATTGAAGATTTGGATTCTTAA 1290 0.4109 MARVFCDFRLLLLVAAVVFIYIQIEAENHCTSHMRSLIDQISLQQGRIVALEDERKLRDQECGQMKSRVQDLERKDVRRLIDKVQVPVAAVVIMACNRADYLERTINSVLKYQRDISSRFPLFVSQDGSNSDVKSKALSHDELSYMQHLDFESVQTERPGELIAYYKIARHYKWALGQLFDKHNFSRVIILEDDMEIAPDFFDYFEAMATLLDKDKSIMAVSSWNDNGQRQFVHDPYELYRSDFFPGLGWMLTRSTWDELSPKWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFFKQYLEPIKLNEVQVDWKSIDLSYLLEDKYAIHFANNIKKAKPVSGADIVQKAHNIDGDVRIKYKDQWDFENIAQQFGIFQEWKDGVPRAAYKGVVVFRYQTTRRIFLVGPESLKLLQIEDLDS* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0006 429 Gene3D - 347 424 - -
Tpr7g0006 429 SUPERFAMILY Nucleotide-diphospho-sugar transferases 90 424 IPR029044 -
Tpr7g0006 429 CDD GT13_GLCNAC-TI 88 418 - -
Tpr7g0006 429 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 310 IPR029044 -
Tpr7g0006 429 PANTHER ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE-RELATED 20 425 - -
Tpr7g0006 429 Pfam GNT-I family 21 424 IPR004139 GO:0006486|GO:0008375
Tpr7g0006 429 PANTHER PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE 20 425 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0006 1 426 Glycosyltransferase AT4G38240 66.817 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0006 K00726 - gmx:100795005 768.844