Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0005 ATGAGTGGAGCTGTTATCGTTGCTGTTGCCGCTGCTATTGGAAATTTATTGCAAGGATGGGATAATGCAACTATTGCAGGGTCTATTTTATACATAAAGAGGGAATTTCAATTAGAAAGTGAACCCACAGTTGAAGGTCTAATTGTAGCTATGTCACTTATTGGAGCCACCGTGGTTACTACATGCTCTGGAGCCCTATCAGACTTGTTTGGACGACGCCCTATGCTGATTATCTCTTCCCTCCTTTATTTTGTTAGTTCTCTTGTCATGTTTTGGTCACCAAATGTTTATATACTACTATTTGCAAGACTTTTAGATGGCTTGGGAATTGGTTTGGCAGTTACCTTGGTACCTCTTTATATATCTGAGATAGCTCCTCCTGAGATTAGGGGATCACTTAATACACTTCCACAATTCACTGGTTCTGCTGGTATGTTTTTATCTTACTGTATGGTGTTTGGGATGTCACTAACCAAGACACCAAGCTGGAGACTCATGTTGGGTATTCTTTCAATCCCCTCTCTTATTTATTTTGCACTAACACTATTGTTATTGCCGGAGTCTCCAAGATGGCTTGTTAGTAAAGGTCGAATGCTTGAGGCTAAACAAGTTTTACAAGGCCTTCGTGGATGCGAAGATGTTGCTGGTGAGATGGCTTTACTGGTTGAGGGTCTTGGAGTCGGGGGTGATACATCCATAGAAGAGTACATGATAGGTCCAGCTAATGAATTAGCTGATGAAGAGGATCCATCTATAAGTAAAGATCATGTAAAATTGTATGGGACTGAACATGGCCAATCTTGGGTTGCTAGACCTGTCACCGGACAAAGTTCTGTTGGCCTTATATCTAGGAAAGGAAGCATGGCAAATCCGAGTGGTCTAGTGGACCCTTTGGTGACCTTATTTGGTAGTGTCCACGAGAAGGTCCCGGAAACAAGAATGGGAAGCACTCTTTTTCCACACTTTGGAAGCATGTTCAGTATTGGCGGAAATAATCAACCAAGAAATGAAGATTGGGATGAAGAAAGCCTTGCTAGAGAGGGTGATGACTATATTTCTGATGCTGCTGCCGGTGATTCTGATGACAATTTGCACAGTCCATTAATTTCACGTCAAACAACTAGTATGGATAAGGACATGCCTCCTCCTGCTGCCCAAGGCAGTCTTTCAAACATAAGACAGAGTAGTCTTTTACAAGCTGGGAATGCTACAGGAGAACCTGTTGGGAGTACTGGAATTGGTGGTGGTTGGCAGTTAGCTTGGAAATGGTCTGAACAAGAGGGCCCAGATGGAAAGAAGGAAGGTGGTTTCAAGAGAATATATTTACACCAAGAAGGTGGTTCTGGATCTAGACGCGGATCTGTTGTTTCACTTGGTGGTGGTGGTGGTGTTGATATGCCAACAAATAATGGTGAGGCTGTACAAGCTGCTGCTCTTGTGAATCAACATCCAGTTGGACCCATTATGGTTCATCCATCTGAAACAGCTGCAAAAGGGCCAAGTTGGAATGATCTTTTTGAACCGGGGGTGAAGCATGCATTGTTTGTAGGGGTGGGACTTCAAATTCTTCAGCAGTTTTCTGGTATAAATGGAGTCCTCTACTATACACCACAAATTCTAGAACAGGCAGGTGTTGGTTTTCTTCTTTCAAACTTGGGTCTTAGTTCTACTTCATCATCTTTTCTAATCAGTGCAGTGACAACCTTGTTGATGCTTCCTAGTATAGCTATTGCCATGAGACTCATGGATATTTCTGGTAGAAGGACCTTACTACTCACTACAATCCCTATCTTGATAGTATCTCTTATCATATTAGTCCTAGGGAGTCTTGTGGATTTGGGCAGTACTGCAAATGCATCAATCTCAACCACTAGTGTTATTGTCTATTTCTGTTTCTTTGTCATGGGATTTGGGCCAATTCCCAATATACTTTGTGCTGAGATCTTCCCAACCCGAGTTCGTGGTCTCTGCATTGCCATATGTGCTCTTACATTTTGGATATGCGACATCATTGTCACCTATTCACTCCCAGTTATGTTGAATTCTATGGGTCTTGGTGGTGTTTTTGGTTTGTATGCAATTGTGTGTTTCATAGCTTGGGTGTTTGTCTTCTTGAAAGTTCCAGAAACCAAAGGCATGCCACTTGAAGTGATCATTGAGTTCTTCTCCGTTGGAGCAAAACAAGTTGACGCTACTAAAAACAATTAA 2208 0.4221 MSGAVIVAVAAAIGNLLQGWDNATIAGSILYIKREFQLESEPTVEGLIVAMSLIGATVVTTCSGALSDLFGRRPMLIISSLLYFVSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLYISEIAPPEIRGSLNTLPQFTGSAGMFLSYCMVFGMSLTKTPSWRLMLGILSIPSLIYFALTLLLLPESPRWLVSKGRMLEAKQVLQGLRGCEDVAGEMALLVEGLGVGGDTSIEEYMIGPANELADEEDPSISKDHVKLYGTEHGQSWVARPVTGQSSVGLISRKGSMANPSGLVDPLVTLFGSVHEKVPETRMGSTLFPHFGSMFSIGGNNQPRNEDWDEESLAREGDDYISDAAAGDSDDNLHSPLISRQTTSMDKDMPPPAAQGSLSNIRQSSLLQAGNATGEPVGSTGIGGGWQLAWKWSEQEGPDGKKEGGFKRIYLHQEGGSGSRRGSVVSLGGGGGVDMPTNNGEAVQAAALVNQHPVGPIMVHPSETAAKGPSWNDLFEPGVKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGVGFLLSNLGLSSTSSSFLISAVTTLLMLPSIAIAMRLMDISGRRTLLLTTIPILIVSLIILVLGSLVDLGSTANASISTTSVIVYFCFFVMGFGPIPNILCAEIFPTRVRGLCIAICALTFWICDIIVTYSLPVMLNSMGLGGVFGLYAIVCFIAWVFVFLKVPETKGMPLEVIIEFFSVGAKQVDATKNN* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0005 735 Gene3D MFS general substrate transporter like domains 495 733 IPR036259 -
Tpr7g0005 735 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 711 IPR020846 GO:0022857
Tpr7g0005 735 SUPERFAMILY MFS general substrate transporter 9 716 IPR036259 -
Tpr7g0005 735 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr7g0005 735 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr7g0005 735 PRINTS Sugar transporter signature 524 534 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr7g0005 735 PRINTS Sugar transporter signature 623 644 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr7g0005 735 PRINTS Sugar transporter signature 646 658 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr7g0005 735 CDD MFS_GLUT_like 512 709 - -
Tpr7g0005 735 ProSitePatterns Sugar transport proteins signature 1. 63 80 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr7g0005 735 PANTHER - 1 730 - -
Tpr7g0005 735 PANTHER TONOPLAST MONOSACCHARIDE TRANSPORTER 2 1 730 - -
Tpr7g0005 735 Pfam Sugar (and other) transporter 7 222 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tpr7g0005 735 Pfam Sugar (and other) transporter 498 719 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tpr7g0005 735 Gene3D MFS general substrate transporter like domains 3 252 IPR036259 -
Tpr7g0005 735 ProSitePatterns Sugar transport proteins signature 2. 105 130 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr7g0005 735 CDD MFS_GLUT_like 14 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0005 Tpr-Chr7 51117 54036 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0005 1 735 Organic Solute Cotransporters AT4G35300 70.761 0.0 985
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0005 - - mtr:MTR_3g118530 1218.37