Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3643 ATGTGGAGCACCATTGCCAATTTGAAGGAGAATTTGAATAAGATCGCCCTCGATGTTCACGACGAAGACGATGAAGACGACGCCGTTTTAGCTTCGTACGGAATCCCTCCTGACGGCCAAAGTCCTACCGTCTCCGATCGCCGGAATTCTCGTGGCTCCACGCATTCCAATTCGATTCCTAGGTCACCTGCGGCAAACGGAATTACAGATAATGCCTATGCTTCTGAGATAGAGCAATATAGAGCAGAAATCAAGAGACTTCAAGCATCTGAAGCGGAGATTAAAGCACTGTCAGTTAATTATGCAGCACTATTAAAAGAAAAAGAGGATCACATCATTAGACTGAATAAGGAAAATGGCTCGTTAAAACAGAATTTAGAGGCTACAAGTTCTGCATCTTCAAATGGCAATCACAAACTCAAGGGAAGCAGTGACCAGTCATCTAATCGACAGCATAGGTTCGCAGCTCAAATAAAAAACCGTTATGCTACAAACAACGGAACCATGTCTACTTTGGAATCCAATACAATTCCAAGTAAGACGGTATCTAATCATTCAAACTTACAAGTAAAGGACAAGGAGCTAGCAGATTTGGTAGAAGGAAAAAATAGTGCCACAGCAGCAGCACAAGTACAACATACTCATGAGATACAAAAATTGAAGCTGGAATTGGAGCAAGAACGAGATAAATTGGCAAACATTCAGCTACAATTCAACGAGGAACAGAAATTGAACAAGTCTTTTCAAGAGGAGCTTAAATTATTAAAATTGGAAAGAGACAAAACTACAAATGAGGTGAGGCAATTACATAATGAAGTGAATGAAAAGGTATCAGAGATAAAACATCTGCAATTGGAGTTGACTAAACAGGATAAACAGGAAGGTGAAGAAGGTAATGCCATGGATAGCTCCAAAAGACTAATCGAAATTTTAGAGACGGAAAACACCACTCTTAAGATGGAAAAAAGTGAACTTGAGGCTGCACTCAAAGCAAGTAAGGTTTCCTTCACTGGTAACAAGTCACCTGATGCTTCTCAAGTCCAGAATAGGGATTCAAGCAGTGTCAGTGATTTGTCAGATCCTTCCAAAAGTTTTCCCGGAAAAGAAGACATGGAAATATCCTTACAGAAGATGAGTGATGATTTGAAGAAAACACAGCAGGAGAAGGACAAAGCAGTACAAGAATTGACCCGCCTTAAACAACATTTGTTAGAGAAGGAAAATGAAGAGTCAGAAAAAATGGACGAGGATACCAAAATCATTGAAGAACTACGGGATAGTAATAATTACTTAAAGGCTCAAATATTACATCTCGAGAGAGCTTTGAAGCAAGCTACTTCAGATCAGGAGAAATTGAAAATGGCAAACAACAGTGAAATTCTGAAGTCCAGAGAAGTCATTGATGACTTGAACAAAAAGCTTACAAACTGTATAAGCACAATAGATGCCAAAAATATTGAACTAATAAATTTGCAGACAGCTCTTGGACAATATTATGCTGAAATTGAAGCTAAGGAACATGTAGAAGGAGAGTTGGCTCGTGCTAGGGAAAAAACAGCTAGTCTTTCTCAACTGTTGAAAGATGCAGATTGCAGAGCAGATATATTGAGCGGTGAAAAAGAAGAAATTTTAGCCAAGCTTTCTCAATCTGAGAAGGTACAATCAGAATGGAGAAGTAGAGTAAGCAAGCTTGAGGAAGAAAATGCCAAATTGAGACGCGCTCTTGAACAGAGTATGACACGGCTAAATAGAATGTCAGTGGATTCTGATTTTCTTGTTGACAGGCGCATTGTGATAAAACTCCTTATAACTTACTTCCAGAGAAACCACAGCAAAGAGGTTTTGGACTTGATGGTTCGCATGCTGGGATTCTCTGATGAGGACAAGCAAAGGATAGGCCTCGCACAACAAGGTCCAGGAAAAGGTGTTGTCCGTGGCGTTCTTGGGTTGCCTGGTCGCCTGGTTGGAGGTATCTTAGGAGGAAGTGCAACTGAATCAGCTGTAAATGTGGCATCTGATAACCAGTCCTTTGCAGATATGTGGGTTGATTTTCTTCTCAAGGAAACAGAAGAAAGAGAAAAAAGGGAGTTGTCAGGAAGTACAGGTGATTCCATGGGTGGTGATTCACGCGATAAAAATACTAATTCTGCTTCTTCACCACTTTCCATTCCGAGGTTTAGTACTGGAACTGCATCAATTACTTCGCCTACTAATCAGAACATCAGTCCACTCTCTCGTGGATATTTTCAGCATTCTGAACAAATTGGTTCAGAATTCTCAACAGTTCCCCTTACATACTCAGATAGCAAAACAAGTAGTTCAAAACTTCTTCCTAGATACTAA 2343 0.4012 MWSTIANLKENLNKIALDVHDEDDEDDAVLASYGIPPDGQSPTVSDRRNSRGSTHSNSIPRSPAANGITDNAYASEIEQYRAEIKRLQASEAEIKALSVNYAALLKEKEDHIIRLNKENGSLKQNLEATSSASSNGNHKLKGSSDQSSNRQHRFAAQIKNRYATNNGTMSTLESNTIPSKTVSNHSNLQVKDKELADLVEGKNSATAAAQVQHTHEIQKLKLELEQERDKLANIQLQFNEEQKLNKSFQEELKLLKLERDKTTNEVRQLHNEVNEKVSEIKHLQLELTKQDKQEGEEGNAMDSSKRLIEILETENTTLKMEKSELEAALKASKVSFTGNKSPDASQVQNRDSSSVSDLSDPSKSFPGKEDMEISLQKMSDDLKKTQQEKDKAVQELTRLKQHLLEKENEESEKMDEDTKIIEELRDSNNYLKAQILHLERALKQATSDQEKLKMANNSEILKSREVIDDLNKKLTNCISTIDAKNIELINLQTALGQYYAEIEAKEHVEGELARAREKTASLSQLLKDADCRADILSGEKEEILAKLSQSEKVQSEWRSRVSKLEEENAKLRRALEQSMTRLNRMSVDSDFLVDRRIVIKLLITYFQRNHSKEVLDLMVRMLGFSDEDKQRIGLAQQGPGKGVVRGVLGLPGRLVGGILGGSATESAVNVASDNQSFADMWVDFLLKETEEREKRELSGSTGDSMGGDSRDKNTNSASSPLSIPRFSTGTASITSPTNQNISPLSRGYFQHSEQIGSEFSTVPLTYSDSKTSSSKLLPRY* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3643 780 MobiDBLite consensus disorder prediction 33 67 - -
Tpr6g3643 780 Coils Coil 70 125 - -
Tpr6g3643 780 MobiDBLite consensus disorder prediction 702 747 - -
Tpr6g3643 780 Coils Coil 5 25 - -
Tpr6g3643 780 Coils Coil 421 455 - -
Tpr6g3643 780 MobiDBLite consensus disorder prediction 338 371 - -
Tpr6g3643 780 Coils Coil 210 286 - -
Tpr6g3643 780 Coils Coil 547 581 - -
Tpr6g3643 780 Coils Coil 301 328 - -
Tpr6g3643 780 MobiDBLite consensus disorder prediction 126 152 - -
Tpr6g3643 780 PANTHER MYOSIN HEAVY CHAIN - RELATED 1 780 - -
Tpr6g3643 780 MobiDBLite consensus disorder prediction 338 361 - -
Tpr6g3643 780 MobiDBLite consensus disorder prediction 692 747 - -
Tpr6g3643 780 Coils Coil 368 413 - -
Tpr6g3643 780 PANTHER VESICLE TETHERING-LIKE PROTEIN, PUTATIVE-RELATED 1 780 - -
Tpr6g3643 780 MobiDBLite consensus disorder prediction 38 67 - -
Tpr6g3643 780 MobiDBLite consensus disorder prediction 760 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3643 Tpr-Chr6 39716748 39729333 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3643 - - gmx:100794919 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3643 6 39716748 39729333 Tpr6g3643 6 39716748 39729333 ECH
Tpr5g1369 5 26499876 26508823 Tpr6g3643 6 39716748 39729333 PCT