Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3625 ATGGCAACGAAACAAGGACTGAAATCAAAACGATTTGGATCGATTGGTGTGACGAAAGGTGTGAATTCGCCTTCGTCTTCAACAACATCTTCTTCTAAACAGTTTCATGAAACCTCCAATGATGCTCAGAGTTCGCCGGCGTCTTCGTCAGTGAGAAGTAAGCCGCAGCTTTTTCATCCGGAAGTTGTGCCTTTGGAAGAGAAAAAAGTTAAAGAAAATGTTACTGTGACTGTTCGGTTTCGGCCTTTGAATCCAAGGGAAATTCGTCATGGCGAGGAGATTGCTTGGTATGCAGATGGAGATACTGTAGTGCGAAATGAGTATAATCCGTCCATCGCATTTGCTTACGATCGTGTCTTTGGTCCCACGACCACAACTCGTCATGTCTATGATGTTGCCGCTCAGCATGTTGTTAGTGGTGCTATGGAGGGCATCAACGGTACAGTATTTGCATATGGAGTAACAAGCAGTGGGAAGACTCATACAATGCATGGTGATCAAAGATCTCCTGGAATCATACCTCTTGCTGTGAAGGATGCTTTTAGCATTATCCAAGAGACTCCAAACCGAGAGTTTCTCCTTCGAGTTTCGTACTTGGAAATCTACAATGAGGTGGTTAATGACTTATTAAATCCAGCAGGACAGAACTTAAGAATCAGAGAGGATGCTCAGGGCACCTTTGTTGAGGGAATAAAGGAAGAGGTTGTACTCTCCCCTGCTCATGCACTCTCTCTTATTGCAGCTGGAGAAGAGCACAGACATGTTGGGTCCACAAACCTCAACTTACTCAGCAGCAGGAGCCATACAATATTTACCCTGACCATAGAAAGCAGCCCATGTGGTGAATATATTGAAGGAGAAGCGGTAACACTGTCACAATTGAACCTCATTGATCTAGCAGGTTCAGAGAGTTCAAAAGCTGAAACAATTGGCATGAGAAGGAGAGAAGGATCTTATATCAACAAAAGTCTTCTAACTCTTGGAACTGTTATTTCAAAATTGACCGAAGCTAAAGCTAGTCACATACCATATAGGGACTCCAAATTGACTAGAGTGCTTCAGTCTTCTCTTAGTGGTCATGGGCGTGTATCTCTCATTTGCACAGTAACCCCTTCATCAAGTAGCAGTGAAGAGACACATAATACATTGAAGTTTGCTCACCGAGCAAAGCATATTGAAATACAAGCAGCACAAAACAAGATAATTGATGAGAAGTCACTTATCAAGAAATACCAACAAGAGATTCAATGCTTAAAGGAAGAATTGGAACAATTAAAGAGAGGCATTGTCACAGTTCAGCCGAAAGACACTGGGGATGATGACATTGTGCTCCTAAAACAAAAGTTAGAAGATGGTCAAGTTAAGTTGCAATCCAGATTGGAACAAGAAGAAGACGCCAAAGCTGCTTTGTTAGGCAGAATTCAACGATTGACTAAGTTGATTTTGGTCTCCACAAAAGCATCACAGTCAACGAGATTTCCTAACAGGCATGGTCCTCGTAGAAGACATTCCTTTGGAGAAGAAGAGCTGGCATATCTTCCATACAAAAGGCGGGATTTAATCTTAGAAGAGGAAAATATTGACTTGTATGTTAATCTGGAGGGAAATGCTGCATCAGCTGATGATTCTCCAAAAGAGGAGAAAAAGGCAAAGAAACATGGACTACTAAATTGGTTGAAATTACGTAAACGCGAAAGTGCCTTAACAGGCACCAGTGATAAATCCAGTGGAGCAAAATCTACTAGCACACCGTCTACACCTCAAGCAGACAATGGTAACCATGTGGAGTCGAGACTTTCCCATTCTCTGGCTGCAGAAAGCTCTCCATCTGCTGATCATATATCCGAGGCAAGAGAGGATAAAGATATTCACGAGGATAGTTTATTGGGACAAGAGACACCTTTGACAAGTATGAAATCGGTTGATCAAATTGATCTTCTGAGGGAGCAGCATAAAATTTTATTGGGAGAAGTAGCTCTTCATTCCAGTGCATTAAAGAGGCTGTCGGAGGAAACAAGAAAAAATCCTCAAAATAGTCAGATTCATGTGGAGATGAAAAGGTTGAACGATGAAATTAAGGAAAAGAGTGAACAAATAGATTTGCTGGAAAAGCAAATGTCTAATTATTTCATAGCTTCAGAGCAGACAGATCAATCAGGAGTATCACAGGCTGTTGCTGAGCTAATGGAACAATTAAACGATAAATCCTTTGAACTTGAGGTCAAAGCAGCAGACAACCGTGTAATTCAAGAACAGCTTAATCAGAAGATCTGTGAATGCAAAAGCCTGCAAGAAACAGTTGCCTCTTTGAAACAGCAACTGGCAGATGCAATAGAATTGGGGAACATCAGCCCTGCAGCCAATCATTCACAACGTTTCCCTGTAACCAAGGACTCTGATGGGGAACTCCACTTTGATAAAGGAAACATGAACAGTACCAATGAAGGGATTCTTTTGCAAGCACAGGTAAATGAGATAGAACAGCTGAAGCAGAAGGTGACAGAACTAACAGCGTCAAAGGACCAGCTTGAAGTTAGGAATCAGAAACTAGCAGAAGAGAGTTCATATGCTAAAGGGCTGGCTTCAGCTGCTGCTGTTGAGCTTAAGGCACTGTCAGAAGAAGTCGCCAAACTCATGAACGATAATGAGAGATTAGCTGCTGAGCTAGCTGCGTCCAAGAATTCACCTACTCCACGTAGAACTAGTGGAACAGTCCAAAATGGGAGAAGAGATAGTCATGGTAGACTTAGACGAAATGATCAGGGTGGTTCAAACTCAGATGTCAAGAGAGAACTAGCCTTGAGTAAAGACAGGGAACTTTCATATGAAGCCGCTCTTTTAGATAAAGATCAGAAAGAGGCCGAGCTTCAAAGAAAGATTGAAGAGTCAAAACAAAGAGAAGCATATCTGGAAAATGAACTTGCCAACATGTGGGTTCTTGTGGCAAAGCTAAAAAAGTCACAAGGAGCAGAAAATGAGGTTTCAGGGTCTACTAATGATAGTTTGCAATTGGATGGTTTTGATATTTGA 3030 0.4182 MATKQGLKSKRFGSIGVTKGVNSPSSSTTSSSKQFHETSNDAQSSPASSSVRSKPQLFHPEVVPLEEKKVKENVTVTVRFRPLNPREIRHGEEIAWYADGDTVVRNEYNPSIAFAYDRVFGPTTTTRHVYDVAAQHVVSGAMEGINGTVFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTFVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTNLNLLSSRSHTIFTLTIESSPCGEYIEGEAVTLSQLNLIDLAGSESSKAETIGMRRREGSYINKSLLTLGTVISKLTEAKASHIPYRDSKLTRVLQSSLSGHGRVSLICTVTPSSSSSEETHNTLKFAHRAKHIEIQAAQNKIIDEKSLIKKYQQEIQCLKEELEQLKRGIVTVQPKDTGDDDIVLLKQKLEDGQVKLQSRLEQEEDAKAALLGRIQRLTKLILVSTKASQSTRFPNRHGPRRRHSFGEEELAYLPYKRRDLILEEENIDLYVNLEGNAASADDSPKEEKKAKKHGLLNWLKLRKRESALTGTSDKSSGAKSTSTPSTPQADNGNHVESRLSHSLAAESSPSADHISEAREDKDIHEDSLLGQETPLTSMKSVDQIDLLREQHKILLGEVALHSSALKRLSEETRKNPQNSQIHVEMKRLNDEIKEKSEQIDLLEKQMSNYFIASEQTDQSGVSQAVAELMEQLNDKSFELEVKAADNRVIQEQLNQKICECKSLQETVASLKQQLADAIELGNISPAANHSQRFPVTKDSDGELHFDKGNMNSTNEGILLQAQVNEIEQLKQKVTELTASKDQLEVRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNDNERLAAELAASKNSPTPRRTSGTVQNGRRDSHGRLRRNDQGGSNSDVKRELALSKDRELSYEAALLDKDQKEAELQRKIEESKQREAYLENELANMWVLVAKLKKSQGAENEVSGSTNDSLQLDGFDI* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3625 1009 CDD KISc_CENP_E 73 392 - -
Tpr6g3625 1009 PRINTS Kinesin heavy chain signature 144 165 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g3625 1009 PRINTS Kinesin heavy chain signature 258 275 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g3625 1009 PRINTS Kinesin heavy chain signature 293 311 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g3625 1009 PRINTS Kinesin heavy chain signature 342 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g3625 1009 ProSiteProfiles Kinesin motor domain profile. 73 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g3625 1009 MobiDBLite consensus disorder prediction 894 909 - -
Tpr6g3625 1009 MobiDBLite consensus disorder prediction 16 55 - -
Tpr6g3625 1009 MobiDBLite consensus disorder prediction 567 634 - -
Tpr6g3625 1009 Coils Coil 678 705 - -
Tpr6g3625 1009 Gene3D Kinesin motor domain 63 423 IPR036961 -
Tpr6g3625 1009 PANTHER KINESIN-LIKE PROTEIN KIN-7K, CHLOROPLASTIC ISOFORM X1 48 1000 - -
Tpr6g3625 1009 Coils Coil 394 428 - -
Tpr6g3625 1009 Coils Coil 753 780 - -
Tpr6g3625 1009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 427 IPR027417 -
Tpr6g3625 1009 Coils Coil 819 853 - -
Tpr6g3625 1009 ProSitePatterns Kinesin motor domain signature. 292 303 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tpr6g3625 1009 Coils Coil 861 895 - -
Tpr6g3625 1009 MobiDBLite consensus disorder prediction 612 628 - -
Tpr6g3625 1009 MobiDBLite consensus disorder prediction 1 55 - -
Tpr6g3625 1009 MobiDBLite consensus disorder prediction 889 931 - -
Tpr6g3625 1009 MobiDBLite consensus disorder prediction 570 609 - -
Tpr6g3625 1009 Coils Coil 942 973 - -
Tpr6g3625 1009 MobiDBLite consensus disorder prediction 910 931 - -
Tpr6g3625 1009 PANTHER CENTROMERE PROTEIN E 48 1000 - -
Tpr6g3625 1009 SMART kinesin_4 71 400 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g3625 1009 Pfam Kinesin motor domain 79 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g3625 1009 Coils Coil 446 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3625 Tpr-Chr6 39446969 39462178 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3625 1 724 Miscellaneous Gene Families AT5G06670 69.767 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3625 K11498 - gmx:100815027 1665.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3625 6 39446969 39462178 Tpr6g3625 6 39446969 39462178 ECH