Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3623 ATGTCTAGAAAACCAACAACTTCAAATCCTAATATAGGTCTGAGTGGATCTGGTCTTTCACATGCTTACATTCAGTATCCACCGCTTCGGTGTAATGTTCCTGGATCAACGGGATTATTTTATGATGATGGAAATAAGTTGCTACTCTCCCCAACAACTGACCAGGTCTTTTCATGGAAAGTCAGTCTCTTTGAACCTCTCATTGGTCCGTCCACTGACTCAATAAGTGAAGGCCCTATTATAGCTGTTCGGTATTCTTTAGACACAAAGGTTATAGCAATCCAGCGATCGAGCCATGAGATACAGTTTTGGAATAGAGAAACTGCGGAAACATTTAGCCATAAGTGCAGGCCAGAATCAGAAAGTATACTTGGATTTTTTTGGACTGACAGTCAACAGTGTGATATTGTTATTGTTAAGACCAAGGGTCTAGACTTGTGTGCATATAAATCAGGGTCAAAATCACTCGAATTGGTGGAAACAAAGAAACTGAATGTTAGTTGGTATGTTTACACACATGAAAGCCGCCTGGTTCTTCTTGCTTCTGGAATGCAGTGCAAGACATTCCACGGATTTCAGATTTCATCCGCAGATATTGTTCGCTTACCAAGGTTTGAGATGGTTATGGCCAAATCTGAGGCAAATAGTAAGCCCGTTTTAGCAGCTGAAGATATCTTTATTGTCACTGTTTATGGTAGGATATACTGCTTGCAAGTTGATAGAGTTGCAATGCTACTCCATTCCTATAGGCTATATCGTGATGCAGTGATACAGCAGGGTTCTTTACCAATTTATTCCAGCAGGATTGCTGTGAGTGTGGTCGACAATGTACTTCTTATTCATCAAATTGATGCAAAGGTTGTTATACTTTATGATCTCTTTGCGGATTCTCGAGCACCAATATCTGCACCACTTCCTTTATTGTTAAGGGGTTTCCCCAGGTCCAGTACCACATCTCAATTTAGTGGTAGAGACAGTGAAAGTTCAGATGGTAATATTGTGAGTAGCCATGAAGCAGTTACATATGCTGATACATGGATTTTCCTAGTGCCTGACCTCGTATGCGATGTGGCCAATAAGCTATTATGGAAATTCAATTTAGACTTAGAAGCAATTTCTGCCAGTAACTCAGATGTCCCCTCAGTATTAGACTTCCTGCAGCGGCGAAAGTTGGAGGCTAACAAGGCTAAACAGTTGTGCTTGGGCATAACACAGACACTTATTCTAGAGCACAGACCTGTGCCTGTGGTTGCCAAGGCTATGAACGTACTAGTCACCTCATACTCCCATTCAATTAAAACTGGTAGCTATCTGAAGGGGCTGAAACCAGAGATGACATTAAATTCTAGTGCACAAAATGCTGATACTGATGTATCTGCTATAGAAAGAGATGCAACTGGGAAATCAATCATACACGAATCTACCACTAGAGTAGACAGCGGAACTTTGGATTCTGAGGATGAATCACAGTTTGCAAATCTTAAACACAATTCAAAGGAAGCCCATATTGGGGGTAGTATAAACAATGAAAACTCCCTAAGTAATGAAACTCATAGCTCTTATGTTATGCAATCATCTTTACTGTCTGTGCAAGAGGAGTCCCAACTTACTTCAGCAACAATTTCACCAGATGAGATGTACAACTTTGTATTTTCTCCTGTTGATGAAGAGATGGTGGGAGACCCTTCTTACTTGGTTGCTATAATTGTTGAGTTTCTTCACAGTGCAAATTTGGAAAAGATTCGTGTGCTCCCAAATCTATATGTATTGATAATACAACTTCTGGTGCGGAATGAACGTTATGCTGAATTGTCGCTGTTTGTCATAAATAAGATTTTGGAGCCCTCTAAGGAAGTTGCACTTCAACTCCTAGAGTCTGGTCGTCAGAATGCGCAAACTAGGAAGCTTGGTCTGAAAATGCTGAGACAGCTTGGTTTACATAATGATTATGTATTGCTTCTAGTGCAAGATGGATACTACCTTGAAGCCTTGCGATATGCACGGAAGTACAAGGTGGATACCATCCGACCGTCGTTGTTTTTAGAAGCAGCTTTTGTATCCAATGACTCCCAGCATCTTGCTGCAGTTCTAAGATTCTTTACAGATTTCCTTCCTGGCTTCAAAAACACCTCAGAGCATAATAGATACTACCGCATACTGAATGAGATGAACTCTTCCATGACTGTTTGA 2190 0.4073 MSRKPTTSNPNIGLSGSGLSHAYIQYPPLRCNVPGSTGLFYDDGNKLLLSPTTDQVFSWKVSLFEPLIGPSTDSISEGPIIAVRYSLDTKVIAIQRSSHEIQFWNRETAETFSHKCRPESESILGFFWTDSQQCDIVIVKTKGLDLCAYKSGSKSLELVETKKLNVSWYVYTHESRLVLLASGMQCKTFHGFQISSADIVRLPRFEMVMAKSEANSKPVLAAEDIFIVTVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSLPIYSSRIAVSVVDNVLLIHQIDAKVVILYDLFADSRAPISAPLPLLLRGFPRSSTTSQFSGRDSESSDGNIVSSHEAVTYADTWIFLVPDLVCDVANKLLWKFNLDLEAISASNSDVPSVLDFLQRRKLEANKAKQLCLGITQTLILEHRPVPVVAKAMNVLVTSYSHSIKTGSYLKGLKPEMTLNSSAQNADTDVSAIERDATGKSIIHESTTRVDSGTLDSEDESQFANLKHNSKEAHIGGSINNENSLSNETHSSYVMQSSLLSVQEESQLTSATISPDEMYNFVFSPVDEEMVGDPSYLVAIIVEFLHSANLEKIRVLPNLYVLIIQLLVRNERYAELSLFVINKILEPSKEVALQLLESGRQNAQTRKLGLKMLRQLGLHNDYVLLLVQDGYYLEALRYARKYKVDTIRPSLFLEAAFVSNDSQHLAAVLRFFTDFLPGFKNTSEHNRYYRILNEMNSSMTV* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3623 729 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 18 725 IPR040371 GO:0010506|GO:0035658
Tpr6g3623 729 Pfam Colon cancer-associated protein Mic1-like 562 702 IPR009755 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3623 K24763 - gmx:100500389 1229.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3623 6 39408042 39419555 Tpr6g3623 6 39408042 39419555 ECH