Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3616 ATGGCTAACTTCAAAACCCTCTTATCCATAGCCATAGCCTTCTTCACAACCTTTCTCTTCTCTTCCTTTGTCAATGCCACTTACTACCAAAATATCTCTCCTTCATTCCTTGGTTTCAAGCAAGAAAAACTCACTCACATCCATTTCTTCTTGCATGACATCGTTACAGGCCCAAAGCCCACTGTAGTCATATCCTCCGAGTCTCCCTTAAACGGTAAATCCAAATCACCCTTACCATTTGGAGCCATAGTGGTTTTGGAAGACCCACTAACCGTTGGACCTGAGCTTGAATCCAATCAAATTGGAAAAGCTCAAGGTTTTTACTTAACCGTGTCTCAAGATGCTGTGCTTGAATTAGAACTTGTTATGGGAATGACCTTTGCGTTTACAGAAGGAAAATACAACGGTAGCACACTAAGTGTGTTGGGGCGCAACACAATTGGAGCCCCCGTTAGGGAAATGCCTATAATTGGTGGAACAGGGGAATTTCGATTTGCACGTGGCTATATTCAAGCGAAAACACATTCGGTTGATTACCATAAAGGTGATGCTCACGTGGAATATAATGTCTACGTGTTTCATTATCCTTCCACTTCAGGATCTGAAGAAATTTTTGCAGACGGAAGTCAATTCACGACTGAACCTATGATGGGCAAAATATAA 663 0.4193 MANFKTLLSIAIAFFTTFLFSSFVNATYYQNISPSFLGFKQEKLTHIHFFLHDIVTGPKPTVVISSESPLNGKSKSPLPFGAIVVLEDPLTVGPELESNQIGKAQGFYLTVSQDAVLELELVMGMTFAFTEGKYNGSTLSVLGRNTIGAPVREMPIIGGTGEFRFARGYIQAKTHSVDYHKGDAHVEYNVYVFHYPSTSGSEEIFADGSQFTTEPMMGKI* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3616 220 Pfam Dirigent-like protein 45 193 IPR004265 -
Tpr6g3616 220 Gene3D - 37 194 IPR044859 -
Tpr6g3616 220 PANTHER DIRIGENT PROTEIN 2 203 - -
Tpr6g3616 220 PANTHER NUCLEOPORIN-RELATED 2 203 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3616 Tpr-Chr6 39344787 39354157 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3616 - - gmx:100790549 270.781