Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3607 ATGAAGATGGAAATCAAAGAGGATGATGTTGAGGGTGGTGGTAAGCAGATCAAAGGAGGAATAACAGAACCATTGATACATGCAAGCAAAGTAGAACAACATCATCATCCATGGATGGTTTATTTCACCACATTCATTGCTGTTTGTGGTTCTTATGAATTTGGTGCTTGTGCTGGATATTCATCTCCAACTCAAGATGCTATCAGGAAGGATCTTAATCTGTCTTTGGCAGAGTACTCTTTATTTGGCTCCATCTTGACTTTTGGTGCGATGATTGGCGCAATAACAAGTGGGCCTATTGCTGATTTTGTAGGACGAAAGGGGGCAATGAGAGTGTCGAGCGCATTCTGTATCGCAGGGTGGCTTGTTATTTACTTTTCTGAGGGTCCAGTGCCTTTGGATATTGGTAGATTAGCAACAGGATATGGAATGGGAGTTTTTTCATTTGTGGTTCCTGTCTTCGTAGCAGAAATTGCGCCAAAAGAACTTCGAGGAGCCCTTACTACATTAAATCAGTTTATGATTGTTACTGCAGTATCTGTATCATTCATAATTGGAACAGTACTTTCATGGAGGGCTTTAGCTATAATCGGCCTTATTCCCACCGCTGTGTTGCTTTTGGGTCTGTTCTTCATTCCAGAGTCTCCGAGATGGCTGGCAAAGCGAGGACGCACAAAAGATTTTGTAGCAGCATTGCAAATACTTCGCGGAAAAGACACTGATATCTCTCAAGAGGCAGAAGAAATTCAGGATTATATAACAAGTTTAGAACAGCTCGCAAAACCGAAAATGCTGGATTTGTTTCAAAGAAGATATTTGCGCTCACTCACGATTGGAATAGGGCTTATGGTTTGCCAGCAACTTGGTGGAATCAATGGAGTTTGCTTTTATACTAGCAGTATTTTTGATCTAGCAGGATTTCCTTCTACGACAGGGAGTATAATTTATGCTATCCTTCAGATTGTGATCACAGGTGTTGGAGCAGCCCTCATAGATAAAGCCGGCAGGAAGCCCTTACTTTTGGTATCTGGATCAGGACTAGTTGCAGGTTGTATATTTACAGCAGTTGCCTTCTATCTTAAGGTTCATGATGTGGCTGTGGAAGCAGTCCCGGCACTTGCCTTAACCGGCATACTGGTCTACATAGGATCATTTTCAATCGGAATGGGAGCAATTCCATGGGTTGTGATGTCCGAGATATTTCCTGTCAATATTAAAGGGCAAGCAGGAAGCCTAGCGACATTAGTGAACTGGTTTGGCGCATGGTTATGCTCCTATACTTTCAACTTTCTCATGAGTTGGAGCTCTTATGGTACCTTCGTTCTTTATGCTGCAATCAACGCGCTAGCTATATTATTTATAGTTTTAGTAGTACCAGAAACCAAAGGTAAAAGCCTTGAACAATTACAGGCAGCCATTAACGCGTAG 1428 0.4216 MKMEIKEDDVEGGGKQIKGGITEPLIHASKVEQHHHPWMVYFTTFIAVCGSYEFGACAGYSSPTQDAIRKDLNLSLAEYSLFGSILTFGAMIGAITSGPIADFVGRKGAMRVSSAFCIAGWLVIYFSEGPVPLDIGRLATGYGMGVFSFVVPVFVAEIAPKELRGALTTLNQFMIVTAVSVSFIIGTVLSWRALAIIGLIPTAVLLLGLFFIPESPRWLAKRGRTKDFVAALQILRGKDTDISQEAEEIQDYITSLEQLAKPKMLDLFQRRYLRSLTIGIGLMVCQQLGGINGVCFYTSSIFDLAGFPSTTGSIIYAILQIVITGVGAALIDKAGRKPLLLVSGSGLVAGCIFTAVAFYLKVHDVAVEAVPALALTGILVYIGSFSIGMGAIPWVVMSEIFPVNIKGQAGSLATLVNWFGAWLCSYTFNFLMSWSSYGTFVLYAAINALAILFIVLVVPETKGKSLEQLQAAINA* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3607 475 SUPERFAMILY MFS general substrate transporter 33 469 IPR036259 -
Tpr6g3607 475 Gene3D MFS general substrate transporter like domains 32 474 IPR036259 -
Tpr6g3607 475 ProSiteProfiles Major facilitator superfamily (MFS) profile. 39 462 IPR020846 GO:0022857
Tpr6g3607 475 ProSitePatterns Sugar transport proteins signature 1. 327 344 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr6g3607 475 PRINTS Sugar transporter signature 134 153 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr6g3607 475 PRINTS Sugar transporter signature 286 296 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr6g3607 475 PRINTS Sugar transporter signature 375 396 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr6g3607 475 PRINTS Sugar transporter signature 398 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr6g3607 475 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 36 474 - -
Tpr6g3607 475 ProSitePatterns Sugar transport proteins signature 1. 97 114 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr6g3607 475 Pfam Sugar (and other) transporter 51 471 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tpr6g3607 475 PANTHER - 36 474 - -
Tpr6g3607 475 CDD MFS_GLUT6_8_Class3_like 41 468 IPR044775 GO:0008643|GO:0051119
Tpr6g3607 475 TIGRFAM SP: MFS transporter, sugar porter (SP) family 38 468 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3607 Tpr-Chr6 39132470 39136248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3607 32 474 Organic Solute Cotransporters AT5G18840 59.910 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3607 K03444 - gmx:100785248 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3607 6 39132470 39136248 Tpr6g3607 6 39132470 39136248 ECH