Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3606 ATGATGACAGACGAGGAACTGTTACAGAAGATAGAAGAGTTGACCAACAACACCAAACATCATCAATTGGAAACTCTTAACTCAATTCTTCATCATAATTGTTCTGTTAACTATCTTCAACCTTTTTTTAATAACAACAAAAGTGTTGATGTTGATCCTTCCACTTTCACACGCCTTGTTCCTTTGTCTTCCTATGAAGATTACGTTGACTTTATTCACCAGATGGCTGATGATGGAAATCATGATCCTCTTCTCTCTGTTGATCCTCTTCTCTGTTTTTTCTATAGCTCGGGAACTACTTCCATGAAACCAAAACTGATCCCTTACTTTGATTCAACCCTTTCCAAAGCTGCCTCATTTGTTGGTCACCGGGGCAGTATCGCGGTTCTTCAAAGGTTGTTTCCTCCAAGGCCTAATATCAACAAAATCCTATGGTTTCTCTATGCTGACAAAATTACAACTACAACTAAAAGTGGCATAAAAGTTATGGCAGCTTCTTCATACCCTTTACAAAGTGGTAAGGTAACTTCTCAACAACTTGCAATGTTCTCTAGTCCCCTTGAAGTCATTCTTGGATCAAATGTTGAGCATCAAATGTATTGTCACATTCTATGTGGTCTTAGGAATCTTGATATTATAGATGGAATTAATGCTCCATATGCCATAGGTTTGGTTAAAGTATTTAGTTTTTTCGAGTCGAAATGGGAGCAGCTATGTGATGATCTTGATTGTGGTTTTCCAAGTCATGAGATATCAGATAAGGGAATGAGGGAAGATGTGATAAAAACTATTGGTGGTCCTCAGCATGAATTGTCGAATAGAATAAGATTAGTTTGTGAAGGTAAAAATTGGGGCGGGATTGTACGCAGATTGTTTCCGAATGTTCGGTTTATTAAATGTGTTACGACCGGAAGCATGAAGCAGTACTATCAAAAACTTAAGTTTTATGCAGGAGAAGATGTACCTATTCTTGGAGGAGATTACTTTGCTTCAGAGTGTTGTGTAGGTTTAAATTTAGACATAACGCAACCGCCTGAAACAACGCGGTTTGTAATGCTTCCTACCTTCGCCTACTTTGAGTTTCTTCCATTTCAGATGAATGAGAATGAGAAAGATGTTGTTGAACAAACAGTGGACCTTACCGGGGTTGAAGTTGGGAAGATGTATGAAGTGGTTGTAACTACTTACCGAGGATTTTATCGATACAAATTAGGCGATATAGTTAGAGTTGTTGGTTTTCATAATTCATCGCCTGAGGTCGAATTTGTGATGAGAGCGCCGAAATCTTCAGCCGAGATTCTCACCGAAAAAGACTTGTTTACAGCAGTTGAAAATTTTCAACTTGCACTTAGAAGTACTATGGGAATTGACTCCATTGAGATTGTTGAGTTTGCAAATTTCTTGGATCAAGAATCGACTCCGAAGCAGTTAAAGGTATTTATAGAAGTCAAAGAGGAATCTAAGTTTTTGGAGGAAAGAGTTAAATTGTTTAAAACTTGTATTTCCTCTCTTGAGAGTGGTTTAGGAGCATTGTACAAGGTGCAGAGAGATAAAGGTCATATAGGGAATTTAATGATAGGCATCCTAAGACATGGAGCTTTTAATCAGTTATCTGATTTGGCTATTAAGAATGGTACATCAGCTAGTCAATATAAGCCACCTAAGATTATAAGGAATCATGAAGTTGTCAATTTCTTGGAAAAATTAGCTTTTGTTACAGTATCAATGGATGACTAA 1737 0.3736 MMTDEELLQKIEELTNNTKHHQLETLNSILHHNCSVNYLQPFFNNNKSVDVDPSTFTRLVPLSSYEDYVDFIHQMADDGNHDPLLSVDPLLCFFYSSGTTSMKPKLIPYFDSTLSKAASFVGHRGSIAVLQRLFPPRPNINKILWFLYADKITTTTKSGIKVMAASSYPLQSGKVTSQQLAMFSSPLEVILGSNVEHQMYCHILCGLRNLDIIDGINAPYAIGLVKVFSFFESKWEQLCDDLDCGFPSHEISDKGMREDVIKTIGGPQHELSNRIRLVCEGKNWGGIVRRLFPNVRFIKCVTTGSMKQYYQKLKFYAGEDVPILGGDYFASECCVGLNLDITQPPETTRFVMLPTFAYFEFLPFQMNENEKDVVEQTVDLTGVEVGKMYEVVVTTYRGFYRYKLGDIVRVVGFHNSSPEVEFVMRAPKSSAEILTEKDLFTAVENFQLALRSTMGIDSIEIVEFANFLDQESTPKQLKVFIEVKEESKFLEERVKLFKTCISSLESGLGALYKVQRDKGHIGNLMIGILRHGAFNQLSDLAIKNGTSASQYKPPKIIRNHEVVNFLEKLAFVTVSMDD* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3606 578 Pfam GH3 auxin-responsive promoter 10 560 IPR004993 -
Tpr6g3606 578 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 2 575 IPR004993 -
Tpr6g3606 578 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.6-RELATED 2 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3606 Tpr-Chr6 39130200 39132615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3606 8 573 EF-hand Containing Proteins AT1G23160 31.389 2.19e-93 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3606 K14487 - gmx:100786829 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3606 6 39130200 39132615 Tpr6g3606 6 39130200 39132615 ECH