Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3580 ATGGCGACTCTGAAGGATATTGGTATTTCTGCAGCCATCAATCTGTCATCTGCGTTTATGTTCCTTTTGGCGTTTGCAGTGTTGCGACTTCAGCCTTTTAATGATAGGGTATACTTCCCAAAATGGTACCTGAAGGGGATAAGAGGCAGCCCAACAAATTCCAGATCAGCCGTCAAGAAATTTGTTAACCTTGACACTGGGACCTATATTAGGTTCCTCAATTGGATGCCTGCAGCATTGCATATGCCTGAACCCGAGCTTATTGATCATGCAGGCCTTGACTCAACCGTCTTTATTCGGATTTATTTTCTTGGTGTCAAAATATTTGCCCCAATTACCCTACTGGCTTTTATGGTTTTGGTTCCCATTAACTGGACTGGGAAAACTTTGGAAGCACCAGCAGCCAAGGATTTGACATTTAGCGACATTGACAAGCTTTCAATATCGAACGTTCCACTTGGATCAAAGAGGTTCTGGGCGCATATTGGTATGTCATATGTCTTCTCAGCTTGGACATGCTATAGTCTTTATAAGGAATACATGATTATTGCAACAATGAGATTGCGATTTTTGGCATCTGAACGCCGTCGTCCAGATCAATTTACTGTCTTGGTGAGGAATGTTCCCCCAGATATGGATGAATCAGTCAGTGAGCACATTGAACATTTTTTTTGCGTCAACCATCCTGATCACTATCTGATGCATCATGTTGTTTATAATGCAAACACACTTGCATCAATAGTTGCAAAGAAGACGAACTTGAAAAACTGGTATGTTTACTATCATAACAAATATGAAAGAGACCCTTCAAAGAGACCAACTACTCGGACAGGTATGATGGGTCTCTTGGGGGCTAAAGTTGATGCCATTGATTACTATACTGGATTGATTGATAAGTTGAGCGAAGAAGAAGCTAAAGAAAGAGAAAATGTTATGAACGATCCCAATGCTATTATGCCTGCAGCATTTGTTTCATTCAGAACCCGATGGGGGGCGGCTGTGTGCGCTCAAACTCAACAAACTAGTGATCCTACCGTTTGGCTGACAGAATGGGCTCCCGAGCCTAGGGATATCTTTTGGGAGAATCTTGCAATTCCATATTTTGACCTGAATCTTAGAAGATTAATCACCACTGTCTCTATGTTTTTCCTTACTTTCTTCTTTATGATACCTATAGCCTTTGTCCAATCTCTAGCTAACATTGAGGCAATCGAGAAGGTCTTTCCTTTCTTGAAATCAATAATTGAAAAAGAATCTGTGAAGTCTGTTATTCAAGGATTTCTGCCAGGACTAGCACTAAAGATATTTCTCATAATGCTTCCAAAATTGATCTGGGCAATGTCCAAAATGGAAGGTTACACATCGTTTTCCAGCTTGGAACGGAGATCAGCTTCAAAATATTATTTATTTGTTCTCGTCAATGTGTTCCTTGGGAGCATTGTAACTGGAACGGCATTTCAGCAACTCGAGCTGCTCATTAACCAGCCCTCTTCAGAGTTCACAAAAACTGTTGGCAGCACAATTCCCATGAAAGCCACATTCTTCATTACATACATAATGATAGATGGGTGGGCTGGAATAGCTGGAGAAATCATCAGGATAGCTTCGTTAATCACGTTCCACATAAAAAACACATTTTTAGTGAAAACAGATCAAGACCGAGAGAATGCTATGGATCCTGGTAGCTTGGATTTTGCTACATCTGAACCTCGAATCCAGTTATATTTCATGCTGGGGCATGTCTATGCTCCAGTCACACCTTTACTTCTTCCCTTCATCGTAGTCTTCTTTGCTTTTTCCTACATGGTCTATCGGCACCAAATTATCAATGTATATAACCAGCAATACGAGAGTGGAGCAACTTTTTGGCCCGATGTCCACCGTAGAGTAATCATCGGCTTGATTATATCTCAAATTCTTCTGATGGGATTGCTTAGTACAAGAGGCGCAAATAAGTCGACACTATTGCTTATTGCACAACCCGTCTTGACAATCTGGTTCCACAGATATTGCAAAGGGCGCTTCGAATCTGCATTCGTAAAATTCCCTCTAGAGGATGCAATGGTGAAGGATACACTTGAACGGGCTGTTGAACCAACCTTGAACCTGAGACTTTATCTTCAGGATGCATATGTACACCCAGTTTTTAAAGGTGGCAACTTCGGAAAAGCTGCAATCATTGATGATGAAGAAGAGAATCCTCTTATTCAAACAAAGAGAGCTTGTCGGAGTAGCAAGCCAGAATCTGATAATGAAGGTGCTAGTACAGGCAGTTGCTAA 2280 0.4123 MATLKDIGISAAINLSSAFMFLLAFAVLRLQPFNDRVYFPKWYLKGIRGSPTNSRSAVKKFVNLDTGTYIRFLNWMPAALHMPEPELIDHAGLDSTVFIRIYFLGVKIFAPITLLAFMVLVPINWTGKTLEAPAAKDLTFSDIDKLSISNVPLGSKRFWAHIGMSYVFSAWTCYSLYKEYMIIATMRLRFLASERRRPDQFTVLVRNVPPDMDESVSEHIEHFFCVNHPDHYLMHHVVYNANTLASIVAKKTNLKNWYVYYHNKYERDPSKRPTTRTGMMGLLGAKVDAIDYYTGLIDKLSEEEAKERENVMNDPNAIMPAAFVSFRTRWGAAVCAQTQQTSDPTVWLTEWAPEPRDIFWENLAIPYFDLNLRRLITTVSMFFLTFFFMIPIAFVQSLANIEAIEKVFPFLKSIIEKESVKSVIQGFLPGLALKIFLIMLPKLIWAMSKMEGYTSFSSLERRSASKYYLFVLVNVFLGSIVTGTAFQQLELLINQPSSEFTKTVGSTIPMKATFFITYIMIDGWAGIAGEIIRIASLITFHIKNTFLVKTDQDRENAMDPGSLDFATSEPRIQLYFMLGHVYAPVTPLLLPFIVVFFAFSYMVYRHQIINVYNQQYESGATFWPDVHRRVIIGLIISQILLMGLLSTRGANKSTLLLIAQPVLTIWFHRYCKGRFESAFVKFPLEDAMVKDTLERAVEPTLNLRLYLQDAYVHPVFKGGNFGKAAIIDDEEENPLIQTKRACRSSKPESDNEGASTGSC* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3580 759 Pfam Cytosolic domain of 10TM putative phosphate transporter 200 362 IPR027815 -
Tpr6g3580 759 Pfam Calcium-dependent channel, 7TM region, putative phosphate 373 645 IPR003864 GO:0016020
Tpr6g3580 759 Pfam Late exocytosis, associated with Golgi transport 7 179 IPR032880 -
Tpr6g3580 759 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 3 745 IPR045122 GO:0005227
Tpr6g3580 759 PANTHER OS05G0393800 PROTEIN 3 745 - -
Tpr6g3580 759 MobiDBLite consensus disorder prediction 739 759 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3580 Tpr-Chr6 38912439 38917856 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3580 K21989 - gmx:100776693 1281.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3580 6 38912439 38917856 Tpr6g3580 6 38912439 38917856 ECH