Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3579 ATGGCGCCTGGTCGTAAGAAAGGCGCCAAGAAATCAACGGCGGCTAGTTCTGTTACTTGCCGGCATTGGAACGTCGGCGATCTTGTGCTTGCTAAGGTTAAAGGCTTCCCTGCCTGGCCTGCAACGGTAAGTCAGCCGGAGAAATGGGGCTACTCGACTGATCCGAAGAAAGTATTTGTTCTCTTCTTTGGAACCGAACAAATTGCTTTCTGCAGTCCTGCTGATATTGAGGCATTTACTGAAGAGAAGAAGCAGTCTCTTGCCAATCGCCAAGGAAGGGGTTCTGATTTTGTTCGCGCAGTACAGGAGATTATTGAATGTTATGAAAAGTTAAACAGAGGAACCCGAGTTGATGAAACTAGCTCTGGTGGTGAAGTTGCTAATGCAGATGCGGTAAATTCACTTGACGTATCTGCCAATTCAGGATTCGAAGATCATGTGGATTCTCCTTGGACAATCAATTCACAAATAAAATCACCAAATTCAGTGACTGGCAACCCTGAGCTAGTTTATGCAGTTGAGGACGACTCAGTTGTCGCACCAAGGGATGAATCTTATATCAAAAAGGCTACTGCTGATACTGTTGCAACTGCAACTGTAAAATCACTTTTGCCAGTGAAACTGGGAATCGAACCAGTTCAAAGGTTCAGAAGCTCATCACAGATCCAAAACTTTGTTGTACATCGTAGTGATGGTGTAAATAATGGTGGCAACATATCAATTGATGCAATTCAGAAAAAAACTATTAGAAGGATTAAACATATCAGGAATTCACCTGAATTTTTTGGTTGTAATGATACCAATTCATCTGCATTTGCCTCAAATGTTAGCATGGATGAAAATGGTTCTGAAATTAATACAATCAATTCTGACGCCTGTAGCTTAAATGAGGGAAGTGCAATAGATTCTATTTTAAAACTTGAACAATCTGATATTATCGAGTGCTCTAAATATGAAGTTGGGTTAAACAAAGTCCTTGATCGTGAAACGAAGGCTGTAGTTGGTAAGAAGAAAAGAAAACCAAACACGATGAGGAAAACCAAGAATGTTGGCACTCAGAATACCAATCCACATTTGCATAATTTTTCTGAAATTCCGAAAGAGAGATGCTCTGACCAAGAGGGAGATGAACACTTGCCCCTCTTGAAGCGAGCCAGAGTTAGAATGGCTAACTCATCATTCACCAAGGAAGAACACAATAGAATTGCACAAGTACGAGAGAAAAGCTGTAAGGAAGCTATTGTCGGTACACCTTTGCAGATAGTCACATCCTCAAATTGTGAAAATGGTTGCCTTGCTGATGGAGACTCATCGGCGTTGAATGGAGTTTTGGGTAATGTTTCTCCTAAGTTACTAGCTCCCTGTTCTGAAAATGGGTCACATGCTTCTAAAGTTAAGAAAGACCAATTATTTGGCTGCTCTGTGGATGATGAATCTCTTTTACCTCCATCTAAACGCATCCATCGTGCTTTAAAAGCAATGTCTGCCAATGCTGCTGAAGAAAGAGCTTGTATTGAATCACCACCTTCTATAATGACATCAAGTGGTAGATCCTGTATATCTACGATCAAGAGATGTTCTTGTATGGCTATTGATAACCAAGGAGGCAATGATTTAGAATTGAAAGGGTCGGACTCTTGTGGCATTGACTGTTCTGATAACCGTGTGTGTAGTTTTTCAACCTGTTCAAATCCAATGATTTTTAGAGAGAATAAGTCATCTTTTGAAGAGGATAAACAGTTGGCCAAGTCTCAACAACATGAATCTGGCAACGATGTCATCCCAGGTGCTAAACACCAAATTGGTGAAGAGCCTAGTGATTCTGTGGTTTGTGCGCCTGCTAAAATAGATTCACAAGTTCTGATGCATGAAAAACTTTCTCCTAATCTTGATGTGAAATGTTTTCAAGTTGGAGGCAACCAAGATTCACCAAAGGCTGACGAAAGTATCAGACCTGCAATCCATTCAAATACGTCTGATACATTAGATCGTCATGGAATAAATTTTGATCCTGTGGCAGGTCCTAATGAAAGTGGCGAATTGTTGCCTCAAAAATGTATCAGCACACCTCAGAATTTTATGGTTGAATGCGAGGATATGAAGGGAACAGCTGATGACCGCAGTCAAATCAATGACACGCATGTGGTTGTAAACGAGGTAAAATGTAAGGGACAACAGGGGGATATGATTTCTCTATCAACATCCAATGGTTGTTCAGGGGAAAAGGGTGCTTTGGGCATTCCGGCAAGCTCATCCTTGACTGATGGGGGGGTTTGCATTCCACAAGGTTCAACTCCAAATACATTAGTTCGCAATGTTTCTACATCAGACAGTAGTAATATTCATCAAAATGGAAGTTGTAGTCCTGATGTACTCCAGAAGAACATTTTATCTGGTCCCGTTGATGAAGGGAAAGATGGGGCGGTGCCAAATCAACAATCAAGATCTATGGACAAGTCAACTGAAGCAGGAAATGCTGCTTTGTTATACTTTGAAGCAATGCTTGGGACATTGAAAAGGACAAAGGAAAATATTAGTCGAGCAACGCGCATAGCTATTGACTGTGCAAAGTTTGGCTTTGCAACAAAGGTGGTAGAAAGTCTTGTAAGCAGTCTGGAAAGTGAGCCAAGCCTTCGTCGGAGAGTGGATCTGTTTTTTCTTGTTGACTCCATTGCTCAATGTTCTCAAGGTTCGAAAGGAGATGTTGGGGCAGTATACCCATCTGCAATGGAAGCATTCCTGCCACGCCTATTGTCTGCTGCTGCCCCTCCTGGAAATACTGCACCAGAAAATCGTAGGCAGTGTCTTAAGGTGTTAAGGCTGTGGTTGGAGCGAAGAATCCTACCAGAATCCACCATTCGCCAACACATCAGGGAACTGAACTCATATAGCAGTTCAGCTTCTACAGGTGTTCACTCGCAGCGTTCATTGAGAACAGAAAGGGCTTTAGATGATCCTATAAGAGAAATGGAGGGTATGCTTGTTAACGAATATGGAAGCAACTCAAGTTTTCAGTTATCTGGATTTCGCATGCCCCGTATGGTTGAAGATGGAGGGAGTGATTCTGATGGAGGGAACTTCAATGCTGTCACGCCTCAACATGATTCTGAAGCATATGAAGTACAACAAGTGTCTCATGCATTTGAAAAACATAGGCGTGTGTTGGAAGATGTTGAGGGAGAGCTTGAAATGGAAGATGTGGCACCCTCTTTGGATGTGGAATTGAATTCGATTTGCAATGTTGATGGAGGAAATGTGTCACAGCTTGATAGTAAACTTCCTCTGTCCTTTGCTCCTCGTTTACCACAAGATGTGCCATCATCTTCCCCACATCCACCACCATTCGCTCCACCACCACCACCACCACCACCACCACCACCACCACCTCCTCCACCTCCACCAACATTGCATCCTATGTCGACGACCTCTGATCAATATCGCACAGTTATAGATTCACAGACAGTGCATGGCAAAACATTTCATTCTCTGGCTCAGCCCTTAGTTTCACCAAGAATTAGTCGACCTATGGATGCAGTGCAGTTTCAAATCCCAGAATGTAGAGACGTGCAGATGCAGATACCAGAGTCTACTCGCTCTTTCAACACTTACCCTGTACGACCACCAGAAAATTCCAGGAGTACCGATGGTTTTACTGTGCACAATAAAGGTTACATACTACGGCCACCACACCGCGTACCATCGGATCAGTTTTCTTTTGTTAATGCAGAAAATCGTCTGAAGTCTCAGAGGGAGGTTCCATCATCCCCTTCATTCTCCAATAGACACCACTCTGTGCAGAGCATGAAGAGGGAGAACTTCTATAACAATCACGAGAGAAATGGGATGAGATGCAATACTCGTGTACCACATGAAGAGAGATGGAATACTCGTGCAGCACATGAAGAGAGATGGAATACTCGTGCAGCACATGAAGAGAGATGGTACAGTCGTACACCACATGAAGAGAGATGGAATACCCGGGTACCACATGAAGAGAGATGGAATACCCGGGTACCACATGAAGAGAGATGGAATACCCGTGCAACATATTCACCATATTCTGGTGTGTCTGCCTTTTATGGTTGTCATCCAAGTGAATCACCAAGATCACCCGTCCGTGGTTTGAGATTTCCTCCCCAGTCAATGAATTACAGAAACTCCACACCTTTTAGACCACACTATGATGATGATGATGATGCAATTCCAGTAGCAAACCGAGGCCCAAACTTTTGGCGGCCTAGGCGAGCAGAAACTACCCGACACTGA 4266 0.4316 MAPGRKKGAKKSTAASSVTCRHWNVGDLVLAKVKGFPAWPATVSQPEKWGYSTDPKKVFVLFFGTEQIAFCSPADIEAFTEEKKQSLANRQGRGSDFVRAVQEIIECYEKLNRGTRVDETSSGGEVANADAVNSLDVSANSGFEDHVDSPWTINSQIKSPNSVTGNPELVYAVEDDSVVAPRDESYIKKATADTVATATVKSLLPVKLGIEPVQRFRSSSQIQNFVVHRSDGVNNGGNISIDAIQKKTIRRIKHIRNSPEFFGCNDTNSSAFASNVSMDENGSEINTINSDACSLNEGSAIDSILKLEQSDIIECSKYEVGLNKVLDRETKAVVGKKKRKPNTMRKTKNVGTQNTNPHLHNFSEIPKERCSDQEGDEHLPLLKRARVRMANSSFTKEEHNRIAQVREKSCKEAIVGTPLQIVTSSNCENGCLADGDSSALNGVLGNVSPKLLAPCSENGSHASKVKKDQLFGCSVDDESLLPPSKRIHRALKAMSANAAEERACIESPPSIMTSSGRSCISTIKRCSCMAIDNQGGNDLELKGSDSCGIDCSDNRVCSFSTCSNPMIFRENKSSFEEDKQLAKSQQHESGNDVIPGAKHQIGEEPSDSVVCAPAKIDSQVLMHEKLSPNLDVKCFQVGGNQDSPKADESIRPAIHSNTSDTLDRHGINFDPVAGPNESGELLPQKCISTPQNFMVECEDMKGTADDRSQINDTHVVVNEVKCKGQQGDMISLSTSNGCSGEKGALGIPASSSLTDGGVCIPQGSTPNTLVRNVSTSDSSNIHQNGSCSPDVLQKNILSGPVDEGKDGAVPNQQSRSMDKSTEAGNAALLYFEAMLGTLKRTKENISRATRIAIDCAKFGFATKVVESLVSSLESEPSLRRRVDLFFLVDSIAQCSQGSKGDVGAVYPSAMEAFLPRLLSAAAPPGNTAPENRRQCLKVLRLWLERRILPESTIRQHIRELNSYSSSASTGVHSQRSLRTERALDDPIREMEGMLVNEYGSNSSFQLSGFRMPRMVEDGGSDSDGGNFNAVTPQHDSEAYEVQQVSHAFEKHRRVLEDVEGELEMEDVAPSLDVELNSICNVDGGNVSQLDSKLPLSFAPRLPQDVPSSSPHPPPFAPPPPPPPPPPPPPPPPPPTLHPMSTTSDQYRTVIDSQTVHGKTFHSLAQPLVSPRISRPMDAVQFQIPECRDVQMQIPESTRSFNTYPVRPPENSRSTDGFTVHNKGYILRPPHRVPSDQFSFVNAENRLKSQREVPSSPSFSNRHHSVQSMKRENFYNNHERNGMRCNTRVPHEERWNTRAAHEERWNTRAAHEERWYSRTPHEERWNTRVPHEERWNTRVPHEERWNTRATYSPYSGVSAFYGCHPSESPRSPVRGLRFPPQSMNYRNSTPFRPHYDDDDDAIPVANRGPNFWRPRRAETTRH* 1422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3579 1421 SUPERFAMILY Tudor/PWWP/MBT 18 113 - -
Tpr6g3579 1421 MobiDBLite consensus disorder prediction 1105 1123 - -
Tpr6g3579 1421 Pfam CID domain 831 955 IPR006569 -
Tpr6g3579 1421 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1312 - -
Tpr6g3579 1421 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1312 1414 - -
Tpr6g3579 1421 PANTHER PWWP DOMAIN PROTEIN 1 1312 - -
Tpr6g3579 1421 PANTHER PWWP DOMAIN PROTEIN 1312 1414 - -
Tpr6g3579 1421 SMART PWWP_4 23 80 IPR000313 -
Tpr6g3579 1421 Gene3D - 829 970 IPR008942 -
Tpr6g3579 1421 SMART 558neu5 830 961 IPR006569 -
Tpr6g3579 1421 ProSiteProfiles CID domain profile. 823 964 IPR006569 -
Tpr6g3579 1421 ProSiteProfiles PWWP domain profile. 25 82 IPR000313 -
Tpr6g3579 1421 MobiDBLite consensus disorder prediction 1103 1123 - -
Tpr6g3579 1421 Pfam PWWP domain 26 108 IPR000313 -
Tpr6g3579 1421 Gene3D - 4 107 - -
Tpr6g3579 1421 CDD HDGF_related 21 104 IPR035496 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3579 Tpr-Chr6 38890042 38904229 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3579 - - mtr:MTR_7g094580 1927.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3579 6 38890042 38904229 Tpr1g1991 1 20382398 20395498 PCT