Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3578 ATGGGTGCTTCACATTCCATCTCTGAAAATTCAATCTATGAATTCACAGTTAAGGATGCAAAGGGAAGAGATGTGGACCTCAGCAGTTATAAGGGAAAAGTTCTTATTGTAGTTAATGTTGCTTCAAAATGTGGATTTACCAATGTCAATTATACCCAGTTAACTGAGCTTTACAACAAATACAAGGATAAAGGACTTGAGATATTGGCTTTTCCATGCAATCAATTTTTGAGCCAAGAGCCTGGAAGTAGCCATGATGCAGAGCAATTTGCATGTACAAGATTCAAAGCTGAGTATCCAATTTTTGGAAAGATACGTGTGAATGGATCCGACGCAACACCTCTTTACAGATTCCTTAAAGATAAGAAATCTGGTTTTCTGGGATCTAGGATAAAGTGGAATTTCACCAAGTTTTTGATTGGCAGGGACGGGCAGGTGCTCCAGCGTTATGGTCCAACCACCTCACCATTTTCCTTTGAAAATGACATCAAGAAGGCCTTGGGAGTGGCTTGA 513 0.3996 MGASHSISENSIYEFTVKDAKGRDVDLSSYKGKVLIVVNVASKCGFTNVNYTQLTELYNKYKDKGLEILAFPCNQFLSQEPGSSHDAEQFACTRFKAEYPIFGKIRVNGSDATPLYRFLKDKKSGFLGSRIKWNFTKFLIGRDGQVLQRYGPTTSPFSFENDIKKALGVA* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3578 170 Gene3D Glutaredoxin 3 168 - -
Tpr6g3578 170 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Tpr6g3578 170 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Tpr6g3578 170 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Tpr6g3578 170 ProSiteProfiles Glutathione peroxidase profile. 2 170 IPR000889 GO:0004602|GO:0006979
Tpr6g3578 170 PANTHER GLUTATHIONE PEROXIDASE 5-RELATED 1 168 - -
Tpr6g3578 170 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Tpr6g3578 170 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Tpr6g3578 170 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Tpr6g3578 170 ProSiteProfiles Thioredoxin domain profile. 6 168 IPR013766 -
Tpr6g3578 170 PIRSF Glutathion_perox 1 169 IPR000889 GO:0004602|GO:0006979
Tpr6g3578 170 PANTHER GLUTATHIONE PEROXIDASE 1 168 IPR000889 GO:0004602|GO:0006979
Tpr6g3578 170 SUPERFAMILY Thioredoxin-like 11 167 IPR036249 -
Tpr6g3578 170 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3578 Tpr-Chr6 38879455 38883502 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3578 - K00432 ahf:112805343 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3578 6 38879455 38883502 Tpr6g3578 6 38879455 38883502 ECH
Tpr6g3578 6 38879455 38883502 Tpr1g1992 1 20401765 20403988 PCT