Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3577 ATGTTCCCTCTAAACCTCACCGGAAACAACACCGTTTTCCCGCCGGATTCGTTCGTTTACGACGCCGATGACATTCCGTTCGGTACAGTGTGGTGGTTTGTTTACGCCGGAATTTCATGTTTACTTGTTATCTTTGCTGGTATCATGTCTGGTCTTACTCTTGGGTTAATGTCTTTGGATTCTGTTGGTCTTGAAATTCTTCAAAGAAGTGGTTCTTTCACTGAGAAAAAACAAGCTGCTGCAATTTTCCCTGTTCTTCAAAAACAACACCAGCTACATGTTACTTTGCTTCTTTGTAATGCTCTTGCTATGGAGGCACTTCCACTTTACCTTGATAAACTTTTTCATCCTGTTGTAGCAGTGTTACTATCAGTAACTTTTGTTCTAGCTTTTGGAGAGGTCATCCCACAAGCTATATGCACAAGATATCGCCTCTATGTTGGAGCAACATTTATCGGGCTTGTACGTGTCCTGATGTTCATCTGTTATCCGATTGCTTACCCTATTGGAAAGGTTATGGATCTATTGCTTGGACACGATGATGTATTGTTTAGGCGAGCACAATTGAAAGCCCTTGTTTCAATCCATAGTGAAGAGGCTGGTAAAGGAGGGGAACTCACACATGACGAGGCGACGATTATCAGTGGAGCACTAGATCTCACTCTGAAGACAGCAGAGGAGGCTATGACACCAATTGAGTCAACTTTTTCCTTGGATGTTGAAGCCAAATTGGACTGGGAAGCGATTGGGAAAATTCTTGAACGAGGTCACAGTCGTATCCCCGTATACAGTGGAAACCCCAAAAATATTATTGGCATTTTACTAGTAAAAAATCTTCTTACTTTAAGAGCTGAGACAGAGTGTCTAGTTAGTGCCGTTTCCCTCCGGAAAATTCCTAGGGTTCCAGCAGATATGCCTTTATATGATATCCTCAATGAGTTTAAAAAAGGAAACAGCCATATGGCAGCTGTAGTCAAGGTTATAAGAGAGAAAAACAACCCTCAGGCAGCTGGTGACTTCGACAAATACAACGATGAAGTAGGCATCAAACATAGTTCTCAACTGACTGTGCCATTGCTAGCCGGGTCTTGTGAGAAATCAGACAATGTTGTCGATATTGACAAGCTTTCTAGGTATCATAACCCTGGAGGATACAACGATGCGAAGAATGCCAACCAACAATGCCAAGAAAATGACACTGCACCAAATAGTTTCCACCACTTTTCAGGTGATAAAGATGGGGAAGTTATTGGCATCATAACCTTGGAGGATGTTTTTGAAGAACTCCTACAGGAAGAAATTGTAGATGAGACAGATGTGTATATAGATGTACAGAGGAGAATACGTGTTGCTGCTGTCGCAGCTGCTTCATCTGTTGCACTAGGCCAAAGGTCGACAGGTCACAAGCCTGCAGGGAATCAAGCAAGCAGGTGA 1434 0.4268 MFPLNLTGNNTVFPPDSFVYDADDIPFGTVWWFVYAGISCLLVIFAGIMSGLTLGLMSLDSVGLEILQRSGSFTEKKQAAAIFPVLQKQHQLHVTLLLCNALAMEALPLYLDKLFHPVVAVLLSVTFVLAFGEVIPQAICTRYRLYVGATFIGLVRVLMFICYPIAYPIGKVMDLLLGHDDVLFRRAQLKALVSIHSEEAGKGGELTHDEATIISGALDLTLKTAEEAMTPIESTFSLDVEAKLDWEAIGKILERGHSRIPVYSGNPKNIIGILLVKNLLTLRAETECLVSAVSLRKIPRVPADMPLYDILNEFKKGNSHMAAVVKVIREKNNPQAAGDFDKYNDEVGIKHSSQLTVPLLAGSCEKSDNVVDIDKLSRYHNPGGYNDAKNANQQCQENDTAPNSFHHFSGDKDGEVIGIITLEDVFEELLQEEIVDETDVYIDVQRRIRVAAVAAASSVALGQRSTGHKPAGNQASR* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3577 477 ProSiteProfiles CNNM transmembrane domain profile. 28 210 IPR002550 -
Tpr6g3577 477 Gene3D - 392 437 IPR046342 -
Tpr6g3577 477 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 17 468 IPR045095 GO:0010960
Tpr6g3577 477 CDD CBS_pair_CorC_HlyC_assoc 224 325 IPR044751 -
Tpr6g3577 477 Pfam Cyclin M transmembrane N-terminal domain 38 209 IPR002550 -
Tpr6g3577 477 PANTHER BNAC05G01850D PROTEIN 17 468 - -
Tpr6g3577 477 SUPERFAMILY CBS-domain pair 216 431 IPR046342 -
Tpr6g3577 477 Gene3D - 210 349 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3577 Tpr-Chr6 38859600 38864495 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3577 K16302 - gmx:100777230 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3577 6 38859600 38864495 Tpr6g3577 6 38859600 38864495 ECH