Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3573 ATGAAGCTCGTTAGGTTTCTCATGAAGTTGAACAACGAAACTGTTTCAATCGAGTTGAAGAATGGTACTATTGTTCACGGCACCATTACAGGTGTTGATATCAGTATGAATACACATTTGAAAACAGTCAAGCTAACTCTAAAGGGGAAAAATCCAGTTACTTTGGATCATCTCAGTGTAAGAGGCAACAACATTCGATATTATATCCTTCCCGACAGCTTGAATCTCGAAACTTTACTGGTTGAAGAGGCTCCTAGGGTCAAGCCTAAGAAGCCAACTGCTGGGAAGCCTCTGGGGAGAGGACGGGGGCGAGGACGTGGACGCGGTCGTGGTCGCGGCCGTTAA 345 0.458 MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEEAPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3573 114 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 110 IPR027141 GO:0006396
Tpr6g3573 114 Gene3D - 50 82 - -
Tpr6g3573 114 Gene3D - 1 49 - -
Tpr6g3573 114 Pfam LSM domain 5 69 IPR001163 -
Tpr6g3573 114 SMART Sm3 5 70 IPR001163 -
Tpr6g3573 114 MobiDBLite consensus disorder prediction 83 114 - -
Tpr6g3573 114 SUPERFAMILY Sm-like ribonucleoproteins 4 113 IPR010920 -
Tpr6g3573 114 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1 1 110 - -
Tpr6g3573 114 MobiDBLite consensus disorder prediction 93 114 - -
Tpr6g3573 114 CDD Sm_D1 2 93 IPR034102 GO:0000387
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3573 Tpr-Chr6 38793251 38796192 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3573 K11087 - jre:109010907 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3573 6 38793251 38796192 Tpr6g3573 6 38793251 38796192 ECH