Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3571 ATGACCCACATGGATTTTCTCAAGAAATTCAAACGCTTTAACCCATTAGAATCTTCTTTAACAATCCTTGGATTCTTCTTTCTTTCCATTCTCTTCTTCATTGGATGTTTCTTCTATGTTGATTATAAAAGTATACTACTTCATTCTAAGGGAACCAAACTATTTTCATTCCATTTTTCTTCTCCTTCACCTTCTCCCCCTCCTCCTCCTGTTGAATTTTTGACTCAACAAGGCGATAACTGTGATGTTTTTTATGGAAATTGGGTTTGGGATGAAACTTATCCACTTTATAATTCTTCAAATTGTGCCTTATTGGATGGAGGTTTTCGTTGCTCTGAGAATGGTAGACCTGATAGTTTTTATACTAAGTGGAGATGGCAACCTAATGATTGTAACTTGCCAAGATTCGATGGAAGGAAGATGTTGGAAAATTTACGAAACAAGCGGTTAGTTTTTGTTGGTGATTCGATTGGAAGGAACCAATGGGAATCACTACTTTGTATGCTATCTTCTGCTGTTACAAACAAGAGTTCTGTCTATGAGGTTAACGGGAACCCAATTTCAAAACACACCGGCTTCTTGGCATTCAAGTTTGCAGATTTCAACTGCACGGTTGAATACTATAGGTCTCCGTATTTAGTAGTTCAAGGACGGCCTCCTCCTGGGGCACCTCATGGGGTAAGATTGACTTTGAGAGTGGATCATATGGACTGGAATTCTCATCGGTGGAGAGATGCAGATGTGTTGATTCTCAATGCTGGACATTGGTGGAATTACGAGAAGACCGTCAAAATAGGTTGTTACTTCCAAATAGGGGATAAAGTGAAGATGAACATGTCTATAGACAATGCATTCAGAGTATCAGTTGAGACAGTAGTTGATTGGATTGCTCGTGAAGTAAACAGGAACAAAACATATGTCCTTTTCCGAACTTATGCTCCTGTGCATTTCAGGGGTGGTGATTGGAATACTGGCGGTGGCTGTCATTCGGAAACACTACCGGATTTAGGCTCCTTGCCGGCACTGTCTGACGATCATTTCAGCACCGTCACCGATGTCTTGTCACAACACGCGAATAAATCCAATGTTTTGAATTTGGACTTACTTAATATCACACAAATGTCAGAACGGAGGAAAGACGGCCATGCATCTATTTACTATCTCGCGAAGGGCAAAGTCTCTATGCAACGGCAAGACTGTAGCCATTGGTGTCTCCCCGGTGTTCCTGATTCATGGAACGAGATTCTTTATGCTCTTATTCTCAAGAAGAAAGCTTTTTCGGAGCGTAATACAACAAAAGTTTCTCAAGTTTCACTATAA 1320 0.4053 MTHMDFLKKFKRFNPLESSLTILGFFFLSILFFIGCFFYVDYKSILLHSKGTKLFSFHFSSPSPSPPPPPVEFLTQQGDNCDVFYGNWVWDETYPLYNSSNCALLDGGFRCSENGRPDSFYTKWRWQPNDCNLPRFDGRKMLENLRNKRLVFVGDSIGRNQWESLLCMLSSAVTNKSSVYEVNGNPISKHTGFLAFKFADFNCTVEYYRSPYLVVQGRPPPGAPHGVRLTLRVDHMDWNSHRWRDADVLILNAGHWWNYEKTVKIGCYFQIGDKVKMNMSIDNAFRVSVETVVDWIAREVNRNKTYVLFRTYAPVHFRGGDWNTGGGCHSETLPDLGSLPALSDDHFSTVTDVLSQHANKSNVLNLDLLNITQMSERRKDGHASIYYLAKGKVSMQRQDCSHWCLPGVPDSWNEILYALILKKKAFSERNTTKVSQVSL* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3571 439 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 10 427 - -
Tpr6g3571 439 Pfam PMR5 N terminal Domain 80 132 IPR025846 -
Tpr6g3571 439 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 10 427 IPR029962 GO:0016413
Tpr6g3571 439 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 133 418 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3571 Tpr-Chr6 38782665 38790254 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3571 - - gmx:100779356 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3571 6 38782665 38790254 Tpr6g3571 6 38782665 38790254 ECH