Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3570 ATGGAATCAAGTCATGTTATATCCATTACAAATGAAGAAGATAGCAACAACAATATTGCTCAAATGAAGAAAGAAACAAACACTCATATTGGAAAAAATAAAATCAACTGTTCTTTTGTTCCAAGGGACAACAATAAGAGGAAGATAAAAAGTGAACATGACATTAAGAAGATGATTCATAGCATCAAAGTAGGACTCTCACTTGTTTTGGTTTCACTTCTTTACATTATAAATCCTCTCTTTGATCAAGTTGGTGAAAATGCAATGTGGGCTATCATGACTGTTGTTGTCATCTTTGAATTCAATGCAGGAGCTACACTTGGAAAAGGCTTCAACCGTGGAATAGGGACTATTGTTGGAGGAGGATTGGGATGCTTAGCAGCAATTTTGGCACAAAACATTGGAGGAGTTGGCAACTCAATTTTCATTAGTACTTCAGTATATATCTTTGGATCATTTGCTACATATTTTCGACTAGTTCCAAAAATAAAGAACAGATATGATTATGGAGTGGTGGTATTTATGCTAACATTCAATCTAGTAGTGGTATCTGGGGCACGTCCAGGAGTTAAAGTTTGGGAATTAGCAAGAGAACGTTTATTGACAATCCTAATGGGTTTCATTGTTGCTATTTGTGTCAATTTATTTGTTTATCCTTTGTGGGCCAGTGATGAACTTCATGATTCCATTGTCTCTAGATTCCACCATCTTGCAAATACAATTCAAGGTTGCTTAGAGGAATGTTCAAAATCAGTCAAGGAAAAGGAAAATCAACCCGATGCTACCAACTTCACAGTTTGCAAGTCAGTGTTGAACTCCAAGTCAAAGGATGAATCATTGGCAAATTTTGCAAAGTGGGAACCTTGGCATGGAAAATTTGGATTTTCCTACCCATGGGAAAAATACTTAAAGATTGGAGAGATTCTTCGAGAACTAGCTTCACTCATTCTTGCGTTGGAACGTTGCCTCCTAGCCTCAAAAAATCCCACTGCAACTTTGAAGCGATCAAAAGCCCAATTAGAACAGTGTGAAGCAATTGGGTCAAGGGTTGTTTGGACTCTACGAGAAGTTGGAGATAGCTTGAAAAAAATGAGAAAATGTGAAGAAAGGGAAAACATTATAGCTAAGTTGAAAACAACTAGAGAAGAGTTGAGTTTGGTGATTTCAACCTCCAATATTTCAGAATTTGAGAATGGTGAAATGCTAGCAATTGCAAGCTTGGTGTTTTTGCTTATGGAAGTGGTTGAGAAGGTAGGTGAATTGGTTATAGAGGCCGGGGAACTTCAAGATAAAGCCGGTTTTCGCACCCGTGTGACTCCAGTCTCTTCATAG 1332 0.3769 MESSHVISITNEEDSNNNIAQMKKETNTHIGKNKINCSFVPRDNNKRKIKSEHDIKKMIHSIKVGLSLVLVSLLYIINPLFDQVGENAMWAIMTVVVIFEFNAGATLGKGFNRGIGTIVGGGLGCLAAILAQNIGGVGNSIFISTSVYIFGSFATYFRLVPKIKNRYDYGVVVFMLTFNLVVVSGARPGVKVWELARERLLTILMGFIVAICVNLFVYPLWASDELHDSIVSRFHHLANTIQGCLEECSKSVKEKENQPDATNFTVCKSVLNSKSKDESLANFAKWEPWHGKFGFSYPWEKYLKIGEILRELASLILALERCLLASKNPTATLKRSKAQLEQCEAIGSRVVWTLREVGDSLKKMRKCEERENIIAKLKTTREELSLVISTSNISEFENGEMLAIASLVFLLMEVVEKVGELVIEAGELQDKAGFRTRVTPVSS* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3570 443 Pfam Aluminium activated malate transporter 53 390 IPR020966 GO:0015743
Tpr6g3570 443 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 3 435 - -
Tpr6g3570 443 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 3 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3570 Tpr-Chr6 38776459 38779864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3570 47 424 Miscellaneous Gene Families AT1G08440 38.542 4.28e-85 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3570 - - gmx:100779890 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3570 6 38776459 38779864 Tpr6g3570 6 38776459 38779864 ECH