Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3567 ATGCTTTCAGCGATCACTCTATCATCACTTTTGTCAAGTTTAGCCATGGAAGCAACGCGATTCTCCTTCTACCACTTCCATCCCCACAACTTCCGACCCAAACCCAACGCATTTCCAGGAAGAAGACACACACAAACAATCCACACAATTAGAACTAGGGTTTCGCTTTTCACAACAAATTCACCTTCGCTTAACCGGAGAATTTACGTTAACTTCTCCGACCGACTCGGAAGTGATTACATGCGCGTTCAGACACCGCATTTGAGTGAAGAAGTTGTTCCGGAAACTAGTGGTAACGATAGTGAAGCAATTGTTGCTTCTTCTGATAACTTGAGAATTTTAGAGGTTAAACCTAAAACGTTCAAAAATAGGTTTCTGAATTTTGTGCGTTTTGGTTCTGTTATTAATGGTGCTGCTGAAACGTTTTTTAAGAGTGAGATTAGGAGGAGATTGTTTGTTACTGCTGTGTTAATTGTGATTAGTCGTGTTGGTTATTTTATTCCTCTTCCTGGATTTGATAGAAGGTTGATACCTAAAGATTATATGAGCTTTGTTGCTGGTTCATCTGTTGATGAACTTGGTGACTTCTCCTCTGAGCTGAAGCTGTCTCTTTTCCAACTTGGAATCAGTCCACAGATAGTAGCATCTATCCTTATGCAGGTATTATGTCATGTTGTTCCTTCTCTAGTAAAGTTGCGGAAAGAAGGTTTGGATGGGCATGAGAAGATTAAGAGTTATATTTGGTGGATGTCATTGGGCTTTGCAATTATAGAAGCTCTAGTAGTTTCTTTCTACTCACTTCCATACTCAATCTACGCTGCTAGTTATAGGATCAAACATGTAATGGTGACAACTTCGTTGCTGGTTTGTGGTGCAATGACTATTACATGGATATGTGATACCATATCAGAATCTGGATTTGGTCAAGGTTCATCTCTTATCATATGTGTTGGAATACTGACGGGGTATATGGAGACATTACACAAAATGCTTACTCAGCTTTCAGTGAGTGCTGTTAGTTGGTGGCCATATGTGCTTGCAGTATTGGGTCTCTTCACAATAGTCACTATGTGGGCAGTTGTAGTAACTGAAGGTTGCAGGAAAGTAAAGCTTCAGTACTATGGTTTCAAACTTGCTTCTGCTGCAAGGGAGCAATCGCCTATTACTGAAGTGGAGCCCTATATTCCTTTCAATATAAATCCAGCAGGGATGCAACCTGTTCTTACCACCTCTTACCTCTTGGCCTTTCCAAGCATTGTCGCTGGTTTGCTTGGGTCACCTTTTTGGGGGAATGTGAAGGAAATATTGAATCCCGAAACTTCTGTTGGTGCTGAACCGTGGGTCTACTATTCAATATATGCCTTCTTTGTCTTCCTTTTCAATATATTTGATATTGCTAACTTGCCAAAGGAAATTGCTGATTACTTGAATAAGATGGGTGCAAGAATACCAAATGTTAAGCCCGGGAAGGCTACAATAGAGTACCTCTCAAAGGTTCAGGCATCCACACGATTTTGGGGGGGGCTATTGTTAAGTGTTTTGGCCACTACTTCAAGTGTTCTTGATCACTATTTACGGCGTACCAATGCTGGATTTGCTATTGGTTTTACATCAGTTCTAATTATTGTTGGTTCCATTATTGAACTAAGAAGATCGTATCAAGCATATAATGTGATGCCAAGCTTAAGCAATGCTTTGAGACGTTATGGTGTATAA 1716 0.4033 MLSAITLSSLLSSLAMEATRFSFYHFHPHNFRPKPNAFPGRRHTQTIHTIRTRVSLFTTNSPSLNRRIYVNFSDRLGSDYMRVQTPHLSEEVVPETSGNDSEAIVASSDNLRILEVKPKTFKNRFLNFVRFGSVINGAAETFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPKDYMSFVAGSSVDELGDFSSELKLSLFQLGISPQIVASILMQVLCHVVPSLVKLRKEGLDGHEKIKSYIWWMSLGFAIIEALVVSFYSLPYSIYAASYRIKHVMVTTSLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLHKMLTQLSVSAVSWWPYVLAVLGLFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSIVAGLLGSPFWGNVKEILNPETSVGAEPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLSKVQASTRFWGGLLLSVLATTSSVLDHYLRRTNAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3567 571 SUPERFAMILY Preprotein translocase SecY subunit 131 556 IPR023201 -
Tpr6g3567 571 Pfam SecY 203 549 IPR002208 GO:0015031|GO:0016020
Tpr6g3567 571 Gene3D SecY subunit domain 135 561 IPR023201 -
Tpr6g3567 571 PRINTS Preprotein translocase SecY subunit signature 151 169 - -
Tpr6g3567 571 PRINTS Preprotein translocase SecY subunit signature 202 222 - -
Tpr6g3567 571 PRINTS Preprotein translocase SecY subunit signature 243 266 - -
Tpr6g3567 571 PRINTS Preprotein translocase SecY subunit signature 278 303 - -
Tpr6g3567 571 PRINTS Preprotein translocase SecY subunit signature 304 327 - -
Tpr6g3567 571 PRINTS Preprotein translocase SecY subunit signature 402 421 - -
Tpr6g3567 571 PRINTS Preprotein translocase SecY subunit signature 447 469 - -
Tpr6g3567 571 PRINTS Preprotein translocase SecY subunit signature 535 553 - -
Tpr6g3567 571 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 125 570 IPR002208 GO:0015031|GO:0016020
Tpr6g3567 571 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC 125 570 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3567 16 571 Miscellaneous Gene Families AT2G31530 69.019 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3567 - - gmx:100803256 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3567 6 38747154 38754018 Tpr6g3567 6 38747154 38754018 ECH