Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3559 ATGGGGACTCTTGTTGAAACTAATGATATAAGCTCGGATTTATACCTTTCATTGGGGCTTACAGAATTGGATAAAGGTGTTGGAGTTCCACGGGTTTTGTCACTTCTTTCCTCACTTCTTGAGAGATCAGTTCAGAAAAATGAAATGCTATTGGAGACAAAACATATAGAAGATGTTGTTACAGTTTTTCATGGTTTAAGAGCACCTACTCTGAGTGTTCATAAGTACATTGATCGTATCTGTAAGTACTCGGGTTGCAGCCCGTCCTGTTTTGTTGTGGCACACATATATATCGATAGATTTCTTCACCATACGGAGATCAAATTGACCTCACTTAATGTGCACCGGCTTCTCATAACCAGCATTATGCTAGCAGCAAAGTTTATGGATGATGCATTCTTCAACAATGCTTACTATGCTAAAGTTGGAGGAGTAAGCACATCTGAATTAAACAGATTGGAAATGAGCTTTTTGTTTGGTATAGATTTTAGACTTCAAGTTAGTGTAGACACATTTGGAAGTTATTGTTTACAATTGGAGAAAGAAGGTTCAGAAACACTTCAAATTGAAAGGCCAATGCAGGCTTGTAGAATTAAAGAAAGTTGGTCAAACAAAGAAGACCCTTCATGTGCTTCCACAATTGCAAGATGA 651 0.3763 MGTLVETNDISSDLYLSLGLTELDKGVGVPRVLSLLSSLLERSVQKNEMLLETKHIEDVVTVFHGLRAPTLSVHKYIDRICKYSGCSPSCFVVAHIYIDRFLHHTEIKLTSLNVHRLLITSIMLAAKFMDDAFFNNAYYAKVGGVSTSELNRLEMSFLFGIDFRLQVSVDTFGSYCLQLEKEGSETLQIERPMQACRIKESWSNKEDPSCASTIAR* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3559 216 Gene3D - 25 213 - -
Tpr6g3559 216 PANTHER CYCLIN 23 203 - -
Tpr6g3559 216 CDD CYCLIN 74 158 IPR013763 -
Tpr6g3559 216 SUPERFAMILY Cyclin-like 74 165 IPR036915 -
Tpr6g3559 216 Pfam Cyclin 57 165 IPR013922 GO:0000079|GO:0019901
Tpr6g3559 216 PANTHER UNCHARACTERIZED 23 203 IPR013922 GO:0000079|GO:0019901
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3559 Tpr-Chr6 38621639 38624396 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3559 - - gmx:100805926 353.599