Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3554 ATGTTGAGGTTTATGGAAGATGGAGAGATAAGCATATCAGCTTATGACACAGCTTGGGCTGCTCTTGTGAAAAATGTTGATGATGAAAATAAGCCACAATTCCCATCTTCTCTTCAATGGATTGCTAATAATCAGCTTCCTGATGGTTCATGGGGAGATGAATTATTTTTGACCCATGATAGAATTCTCAACACCTTGGCTTGTGTTATTGCCTTAAGATCATGGAACATGCACCCTAAGAAGTGTGAAAAGGGAATGAAATTTTTTGTGGAAAATCTATACAAGGTTAAGGATGAGAATTTAGAGCACATGCCAATAGGGTTTGAAGTTGTTTTCCCTTCTCTTCTCAATATAGCTAAAAGTTTGAACATTCAAGTACCAGATGATTCTCCTATCATAAAAGATATATTTGCAATGAGAGACCAAAAACTCAAAAAAATACCAAGAGAGGTGTTGCACAAGGTGCCCACAACATTGCTTCATAGTTTAGAGGGAATGCAAAATTTGGATTGGAAACAACTTCTAAAGCTGCAATCACAAGATGGATCATTCTTGTTCTCTCCATCCTCTACAGCTTTTGCTCTTATGCAAACCAAAGATGAAAATGCTCTCAACTACTTAGCCAAAATTGTTAACAAGTTCAATGGAGGAGTTCCGAATGTCTTCCCGGTGGATTTGTTTGAACACATGTGGGCTGTCGATCGGCTAGAACGCCTTGGAGTTTCAAGATATTTTCAGCAAGAGATTGAGAACTGTGTGAATTATGTGTCAAGATATTGGACTGAGAAGGGTATTTGCTGGGCAAGAAATTCAGAGGTTCAAGATATAGATGACACAGCAATGGGATTTAGACTGCTAAGGTTGCATGGCCACCAAGTTTCAGCAGATGTTTTCAAGCATTTTGAGAAAAGTGGTCAATTCTTCTGCTTTCCTGGACAGTTAAACCAAGCTGTGACAGGCATGTTCAATCTGTATAGAGCTTCTCAAGTGCTATTTAAAGGAGAGAAGATTCTTGAGGATGCCAAGAACTTCTCAGCCAAATTTTTAACTAAGAAACGTGATGATAATGAGCTCTTAGATAAATGGATCATAACCAAAGATTTAGCTGGCGAGGTTGGTTATGCTCTGGATGTTCCCTGGTATGCTAGCTTACCCCGGTTGGAGACAAGATTTTACCTTGAACATTATGGTGGCGAAAATGATGTTTGGATTGGCAAGACCCTTTACAGGATGCCATATGTGAACAATGATGTTTATCTTGAGCTTGCAAAATTGGATTACAACAACTGTCAAGCAGTGCATTATAAAGAATGGGAAGAAGAAATTCAAAGGTGGTATATGGAATCAGAACTAGAAGGGTTTGGATTGAGCAAAAAGAGCCTTCTGTTTGCTTATTTTGTAGCAGCAGCCAGCATATTTGAGCCTGAGAGGTCGCTAGAGCGACTTGCATGGACTAAAACAGCAGCTTTGCTCCGAACACTGAAGTCACATTCCAAAGATGAAGAAACTAGGAGCACATTTGTAGATAAGTTCAATAAATACATTACTGGAGGAGACTACTCAAACAGGTGGTTAAACAAGAACCAGAGAGAGGAGAAACTCCTGGGAGTTTTGCTGACAACTCTTAATCAGCTTGGCCTCCAAATGTTTATGCATCATGACCAAGAAAATTCCCGTTATTTGAATCAAATGTGGCAAAGTTGGCTTTCAAGCTGGCATGATGAAGGAAACATATCTGAAAGAGAAGCAGAACTACTTGTGCAAATCATAAATTTAACTACTGGCTATTGGTCAGAAGAACTACAGTTCAATCCTCAGTACCAGAAATTGCTTGAAGTCACTAACAGAGTCTGTACTAGTCTCCGTAATTGCCAAAGCAACAAGGCGCATACTAGCATCAATAACCGCCAAATAGAGTCAGAAATGCGAGAACTTGTGCAACTGGTGCTTCAAAATTCTCCAAATAGCTTGCACTCCAATATCAAGAATTCATTCCTAATGGTGGCCAAGAGTTTCTACTATGAAGCATACTGTGACTCAGAGACCATTTACTCTCATATTGATAAAGTTCTCTTTCAAAAAGTTAACTGA 2091 0.3917 MLRFMEDGEISISAYDTAWAALVKNVDDENKPQFPSSLQWIANNQLPDGSWGDELFLTHDRILNTLACVIALRSWNMHPKKCEKGMKFFVENLYKVKDENLEHMPIGFEVVFPSLLNIAKSLNIQVPDDSPIIKDIFAMRDQKLKKIPREVLHKVPTTLLHSLEGMQNLDWKQLLKLQSQDGSFLFSPSSTAFALMQTKDENALNYLAKIVNKFNGGVPNVFPVDLFEHMWAVDRLERLGVSRYFQQEIENCVNYVSRYWTEKGICWARNSEVQDIDDTAMGFRLLRLHGHQVSADVFKHFEKSGQFFCFPGQLNQAVTGMFNLYRASQVLFKGEKILEDAKNFSAKFLTKKRDDNELLDKWIITKDLAGEVGYALDVPWYASLPRLETRFYLEHYGGENDVWIGKTLYRMPYVNNDVYLELAKLDYNNCQAVHYKEWEEEIQRWYMESELEGFGLSKKSLLFAYFVAAASIFEPERSLERLAWTKTAALLRTLKSHSKDEETRSTFVDKFNKYITGGDYSNRWLNKNQREEKLLGVLLTTLNQLGLQMFMHHDQENSRYLNQMWQSWLSSWHDEGNISEREAELLVQIINLTTGYWSEELQFNPQYQKLLEVTNRVCTSLRNCQSNKAHTSINNRQIESEMRELVQLVLQNSPNSLHSNIKNSFLMVAKSFYYEAYCDSETIYSHIDKVLFQKVN* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3554 696 Coils Coil 696 696 - -
Tpr6g3554 696 Gene3D - 14 225 - -
Tpr6g3554 696 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 1 410 - -
Tpr6g3554 696 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 1 693 - -
Tpr6g3554 696 SUPERFAMILY Terpenoid synthases 415 693 IPR008949 -
Tpr6g3554 696 Pfam Terpene synthase family, metal binding domain 420 577 IPR005630 GO:0000287|GO:0010333|GO:0016829
Tpr6g3554 696 Gene3D Farnesyl Diphosphate Synthase 430 696 IPR008949 -
Tpr6g3554 696 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 1 693 - -
Tpr6g3554 696 SFLD Terpene Cyclase Like 1 N-term 1 410 - -
Tpr6g3554 696 Pfam Terpene synthase, N-terminal domain 170 376 IPR001906 GO:0010333|GO:0016829
Tpr6g3554 696 Gene3D - 1 428 IPR036965 GO:0010333|GO:0016829
Tpr6g3554 696 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 15 196 IPR008930 -
Tpr6g3554 696 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 181 401 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3554 Tpr-Chr6 38567098 38571948 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3554 K04120 - gmx:100807519 1078.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3554 6 38567098 38571948 Tpr6g3554 6 38567098 38571948 ECH