Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3553 ATGGTTTCACTACGCTTCCCATTCATCTTTTCTAACCCCAAACCACCTCAAAATCCTCGCCGTTTCTCCAAATTCACCGCCGCAGCTGCCTTCGCCGGAGCCACCGCAGCATTCGTCGCTGTCTCTTCCAATGACCGCCACCGTCTCTTTCTCCAGAATGCATTGAATTCTTTAATCTCTTCTGATAACACCTCGCCTCTTTGGGGTTGTCTCAGTTTAGCTGACAGTGGTGTTCCAATTGTTGACTCAAGGACTGGATCCTCATTTCCTTCTGTTCTAGAAGCTTCTCAGAAACTTTGTGGAATTGGGTTGCGAAAGAAATGCATTTTGGGTTTGAAGAACATTGATGTATATGCATTTGGTGTTTATGCTGATGATGAGGAGATAAAGAGGTATCTTTCTGAAAAATATGGGAAATTTTCGGCTTCCGAATTGAAAGGGAATAAGGAGTTTACTGAAGATCTTTTGGAAAATGATATACATATTACAGTAAGGCTTCAAATTGTTTATGGAAAATTGAGCATTCGTTCTGTGCGTAGTGCGTTTGAAGAGTCTGTTGGAAAAAGACTGCAAAAATATGGGGGATCAGATAATAAAGAATTGCTTCAGAGGTTTACTTCACAGTTTAGAGATGAAATCAAAATACCTGGTGGATCTGTAATTCATCTCACAAGAGAGAAGGGCCATGTTCTTCGTACAACAATTGACGGAGAGGAAGTAGGAAGCATCCAAAGTAAACTCCTGTGTAGATCAATCCTAGATTTATATGTTGGCGAGGAACCATTTGATAAACAGGCCAAAGAAGAAATAGAGCTCAACATGGCTTCTTACCTCCAAAGTTAG 843 0.4104 MVSLRFPFIFSNPKPPQNPRRFSKFTAAAAFAGATAAFVAVSSNDRHRLFLQNALNSLISSDNTSPLWGCLSLADSGVPIVDSRTGSSFPSVLEASQKLCGIGLRKKCILGLKNIDVYAFGVYADDEEIKRYLSEKYGKFSASELKGNKEFTEDLLENDIHITVRLQIVYGKLSIRSVRSAFEESVGKRLQKYGGSDNKELLQRFTSQFRDEIKIPGGSVIHLTREKGHVLRTTIDGEEVGSIQSKLLCRSILDLYVGEEPFDKQAKEEIELNMASYLQS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3553 280 Gene3D - 128 271 IPR016089 -
Tpr6g3553 280 Pfam Chalcone isomerase like 98 270 IPR016087 GO:0016872
Tpr6g3553 280 PANTHER FATTY-ACID-BINDING PROTEIN 1 1 279 - -
Tpr6g3553 280 SUPERFAMILY Chalcone isomerase 85 278 IPR036298 GO:0016872
Tpr6g3553 280 Gene3D - 81 256 IPR016088 -
Tpr6g3553 280 PANTHER FATTY-ACID-BINDING PROTEIN 1 1 279 IPR044228 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3553 Tpr-Chr6 38564381 38566578 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3553 - - gmx:100785266 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3553 6 38564381 38566578 Tpr6g3553 6 38564381 38566578 ECH