Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3551 ATGCGGTTGGTTATGGATACGGTTGAAGAAGAATTTGTTGAGATTCCAATTCCAATTCCATCATCTACTTCTTCATCATCAATGGCGAAAAGACCTTGTCCATCTCAAAACCCTAGAATGGAACTCGAAAATCTCCTCTACCAATTCCTCTCCCTTTCCGATCGTCCTTCTCTCTCTCTCGATCTCTCCTTCGAGAATCTTCTTCAATCAATGCCTCCTGATACCGATCTCATCGATCGCGCTCTCAAAATGGGATCTCTACTTCTTGATGCTGCCAAACACTCCTCACGCAAACGCGCTTCTAATCATAATTCAATTGTTTGGCCTCTCCCTCCTGATCTCACTTTCAAGATCTTCTCGATGCTTGATACTCAGAGTCTGTGCTATGTATCTGCTGCTTGTTCGTTTTTTAGCAAATGTGCTAAAGATCCTTTGTGTTATGAGAATCTTGATTTGACAACACTTGTTCCTAAGGTTAACAATGCAGTAGTTGCTACTATGATTCAGCGAGCTGGAAAGGCACTAAGGTCTCTTAAACTTGGTGTTGTCCCTGCTACTGCTTGTTCTCCTGGATTTTGTCAACCAATGGTTTCTACCATCAGAAAGGCTATTGTAGAGGCCCCTAACTTTTCATGGAATGATAAGAGATCTCGCCAAGGGAGAGAGTCATCCGTTCTTACAAGATGCTGTTTAAGCCCTTTAAGTGGGGATGGTGGTGCACCAGGGGCTCTTTTGAGAAAGTTACACCTGTACAATATTGAGAGAATGGACAGCACATCCCTTTGTGGTGCATTGTCGGCGTGCCCATCTCTCCTTGATCTGGAAATTGTCGGAATCCATGTTGAACTGAGGCAAACATTAATGTCAGTAAGTGCAAACTGCCACCTGATTGAGCGTTTGTTTTTTGAGTCTTCAAGAACAGGTAGAGATGACAGCTTGAAAGCGCAAACCTGTTCTGAGCTAGTAAACAATTGTCCTAATCTAACTTCTTTATCTCTTCGAGGGTTTAAGCTACATGATTGTAAAGTTCGTATACTGGTTAAGGGATTTCGGAAACTGAAATATGTTGATTTTTCATCATCATATTCAATCACAGGAAATTTCTTAAGGAACCTTGGAAACTGCAATGGTGGGAATTTGCTCGAGGTCCTAATTCTAAGGGATTGCATGCATCTCAAAGAGATGGAAGTTATTAGGTTTTTGACAGCAATTCTTGCAGGAGATTTCAAATTGCTTATGCATCTTGACATATCCAATAGGGAAGGCCTAGCATGTGAGGCTGACTGGTACCACAGTAATATGCCTATCAAGCAGGTTTTGGAAGCAAGGCCTGATATGCGATTGGTGGCTGAATATCCATCCGAAGGAAGCTACGCCGAGACATTTGATGCTGAAATGAATAGTGATATAAGTCTGCAATTCAGCAGCCCTACATCAGATGGATCAATTTTTATGAGTACATCTGAAAGCAGCTACAACAGTGACCATGGTAGTGGCAATGAGGAAGGACAAGATGCGGTGATTTATGGGGAAAGTTCAGATGAGGACAACAATATGAACCTGTAA 1566 0.4215 MRLVMDTVEEEFVEIPIPIPSSTSSSSMAKRPCPSQNPRMELENLLYQFLSLSDRPSLSLDLSFENLLQSMPPDTDLIDRALKMGSLLLDAAKHSSRKRASNHNSIVWPLPPDLTFKIFSMLDTQSLCYVSAACSFFSKCAKDPLCYENLDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVPATACSPGFCQPMVSTIRKAIVEAPNFSWNDKRSRQGRESSVLTRCCLSPLSGDGGAPGALLRKLHLYNIERMDSTSLCGALSACPSLLDLEIVGIHVELRQTLMSVSANCHLIERLFFESSRTGRDDSLKAQTCSELVNNCPNLTSLSLRGFKLHDCKVRILVKGFRKLKYVDFSSSYSITGNFLRNLGNCNGGNLLEVLILRDCMHLKEMEVIRFLTAILAGDFKLLMHLDISNREGLACEADWYHSNMPIKQVLEARPDMRLVAEYPSEGSYAETFDAEMNSDISLQFSSPTSDGSIFMSTSESSYNSDHGSGNEEGQDAVIYGESSDEDNNMNL* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3551 521 MobiDBLite consensus disorder prediction 487 521 - -
Tpr6g3551 521 Gene3D Ribonuclease Inhibitor 105 419 IPR032675 -
Tpr6g3551 521 SUPERFAMILY F-box domain 96 155 IPR036047 GO:0005515
Tpr6g3551 521 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 41 467 - -
Tpr6g3551 521 PANTHER F-BOX SKIP17-LIKE PROTEIN 41 467 - -
Tpr6g3551 521 SUPERFAMILY RNI-like 240 423 - -
Tpr6g3551 521 Pfam F-box-like 110 152 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3551 K10268 - gmx:100786317 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3551 6 38543972 38549882 Tpr6g3551 6 38543972 38549882 ECH