Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3545 ATGAAGGAGTTTCCTTCTTGTTTTGGAGAAAATGGTGTTCAGGTTGCAGATTCATCTTCTTCATCATCATCATCAAGTACCATAAGAGGACCACAAAATGTTGTTACTTGTATCTATCAATGTAAATTAAGAGGTCGTTCATGTTTGATTACAGTTTCATGGACAAAAAATTTGATGGGCCAAGGCTTAAGTGTTGGAATTGATGAATTGGGTAATCATTGTTTATGTAAGTTTGATATAAAGCCATGGTTGTTTTCAAAAAGAAAAGGGTGTAAGAATTTAGAAGTTGAATCTAGTAAAATTGTTATACTTTGGGATTTGAGTTATGCTAAATTTGGTTCTGGACCAGAACCTTTGGAAGGGTATTATTTAGTTGTTGTGTTCAACAAAAAGATTGTGTTACTTTTAGGAGATCTGAAAAAGGAAGCATGTAAGAAGATTGATAGTGACAACAATGTTGGTGTTTATAATTCTGATGCAATTTTTATTGCAAAAAGAGAACATATTTTTGGGAAGAAATTTTACTGTGCAAAAGCTCAATTTTGTGACAAGGGTAAAGTACATGATGTGAGAATTGAGTGTGATACACTTGTTGGGACTAATGAACCTTGTCTTGTGATTAGAATTGATAGCAAGATAATGATGCAGGTGAAGCAATTGAAGTGGAAGTTTCGCGGTAATCAAACTATTTTGGTGGATGGTTTACCAGTTGAAGTGTTTTGGGATGTTCATAATTGGCTGTTTGGAAATGCTACTGGAAATGCAGTTTTCATGTTTCAAACCTGTGTTTCAGCTGATAAGTTGTGGTCTGGTCAATCTGTTTCTGATCCTTCTCTTCTGACTTGGGCTTATTCTCAGCAGTTTAGAGATTCTCAGTTGCAAGGTCTTGGATTTTCTCTCATTTTGTATGCTTGGAAAAATGAGTAG 927 0.3474 MKEFPSCFGENGVQVADSSSSSSSSSTIRGPQNVVTCIYQCKLRGRSCLITVSWTKNLMGQGLSVGIDELGNHCLCKFDIKPWLFSKRKGCKNLEVESSKIVILWDLSYAKFGSGPEPLEGYYLVVVFNKKIVLLLGDLKKEACKKIDSDNNVGVYNSDAIFIAKREHIFGKKFYCAKAQFCDKGKVHDVRIECDTLVGTNEPCLVIRIDSKIMMQVKQLKWKFRGNQTILVDGLPVEVFWDVHNWLFGNATGNAVFMFQTCVSADKLWSGQSVSDPSLLTWAYSQQFRDSQLQGLGFSLILYAWKNE* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3545 308 PANTHER EXPRESSED PROTEIN 1 307 IPR008586 -
Tpr6g3545 308 Pfam Plant protein of unknown function (DUF868) 31 306 IPR008586 -
Tpr6g3545 308 PANTHER PLANT/T24G3-80 PROTEIN 1 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3545 Tpr-Chr6 38493338 38494889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3545 1 308 EF-hand Containing Proteins AT3G04860 56.452 4.42e-120 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3545 - - gmx:100786850 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3545 6 38493338 38494889 Tpr6g3545 6 38493338 38494889 ECH