Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3536 ATGATATTAATACTAGCAACCCTTATAATCTCCTCATTAAGTTTAATTAATGGACAAATTAGTTCATCATGTACATCCTCTATGATTAGTAGCACATTCACTCCTTGTGCTAATATCATTACAGGAAGCACTAATAATGGTTTAGTACCATCAACTACATGCTGTGATTCATTAAGGTCTTTGATGAGCACTAATATGGATTGTGCTTGTCTTATGATGTCTTCCAATAATCCAATTTTACAACTATCTATTAACCAAGCTCTTGCTATATCTCTTTCACAAGCATGCAATATTAATGGTACCGCTGTACAATGCAAAGCATCAAGTTCTTCTTTGCCAAGTTCTCCTTTACCAGCTCCAGGCCCAGCAGTTATTGGACCAAACAGCCCAACTCTCCCTTCAAGTGCTCCAACTCCCTTAAGCCCTCAAGAAAACACACACAGATAA 447 0.3736 MILILATLIISSLSLINGQISSSCTSSMISSTFTPCANIITGSTNNGLVPSTTCCDSLRSLMSTNMDCACLMMSSNNPILQLSINQALAISLSQACNINGTAVQCKASSSSLPSSPLPAPGPAVIGPNSPTLPSSAPTPLSPQENTHR* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3536 148 Pfam Probable lipid transfer 17 105 IPR016140 -
Tpr6g3536 148 PANTHER LIPID TRANSFER PROTEIN 2 145 - -
Tpr6g3536 148 CDD AAI_LTSS 33 98 - -
Tpr6g3536 148 MobiDBLite consensus disorder prediction 115 137 - -
Tpr6g3536 148 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 103 IPR036312 -
Tpr6g3536 148 MobiDBLite consensus disorder prediction 114 148 - -
Tpr6g3536 148 Gene3D - 21 105 IPR036312 -
Tpr6g3536 148 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 2 145 IPR043325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3536 Tpr-Chr6 38321852 38323601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3536 3 121 Lipid Metabolism Gene Families AT2G48140 46.721 2.23e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3536 - - gmx:100786841 170.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3536 6 38321852 38323601 Tpr6g3536 6 38321852 38323601 ECH