Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3534 ATGTCATCGTCTTTGATATCGGATTTTCTCCACCAAACTGGCGGAACTGCCATCATCGACGGCGGTCTTGCAACAGAGCTTGAACGCCATGGCGCAGACCTCAACGATCCTCTTTGGAGCGCCAAATGCCTCATTTCTACTCCTCAGTCTAACCTCATTCGCCAGGTGCATCTTGATTACTTGGAAAATGGTGCTGACATTATAACAACAGCATCTTATCAAGCTACTATTCAAGGTTTTAAGGAAAAAGGTTTTTCTGATAAAGAAGGTGAAAACATGCTAAGAAGAAGTGTTGAAATTGCTTGTGAGGCTCGTGATTTGTATTATGAAAGATGTGCTGCGTGCTCTTCGGGTGATAAGTCTGATGGTAGAATCCTCAAGAAACGCACTATTCTGATTGCAGCATCAGTTGGGAGCTATGGAGCTTATTTGGCTGATGGATCAGAGTACAGTGGGATTTATGGTGATGCTATCACATTGGCAACTCTCAAAGATTTTCATCGAAGAAGAGTTCAAATTTTGGCAGATTCAGGTGCAGACCTGCTTGCATTTGAAACAATTCCAAATAAGATCGAAGCTCAGGCTTATGTAGAACTTCTGGAAGAAGAGAACATAAAGATTCCAGCATGGTTTTGTTTTAACTCTAAGGATGGAATTAATGTTGTCAGTGGCGATTCTCTGGTGGAATGTGGTTCCATTGCTGAGTCATGCAAGAAAGTCGTCGCTGTTGGAATCAACTGTACCCCACCTAGATTTATACACGATCTTATACTTCTTCTTAAGAAGGTGACTACAAAACCAATTGCTATATATCCAAATAGCGGGGAAACTTATGATGGTGATCGAAAAGAGTGGGTGCAAAATACAGGTGTTACAAATGAAGATTTTGTCTCATATGTTAGTAAATGGTGTGAGTTAGGGGCTTGCCTTATAGGCGGCTGTTGTAGAACGACTCCTGTTACCATTAGAGGGATATACAAGACACTATACAACAGTCAATCTGCTACTCTTGCTACAAAGTGA 1023 0.4145 MSSSLISDFLHQTGGTAIIDGGLATELERHGADLNDPLWSAKCLISTPQSNLIRQVHLDYLENGADIITTASYQATIQGFKEKGFSDKEGENMLRRSVEIACEARDLYYERCAACSSGDKSDGRILKKRTILIAASVGSYGAYLADGSEYSGIYGDAITLATLKDFHRRRVQILADSGADLLAFETIPNKIEAQAYVELLEEENIKIPAWFCFNSKDGINVVSGDSLVECGSIAESCKKVVAVGINCTPPRFIHDLILLLKKVTTKPIAIYPNSGETYDGDRKEWVQNTGVTNEDFVSYVSKWCELGACLIGGCCRTTPVTIRGIYKTLYNSQSATLATK* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3534 340 ProSiteProfiles Homocysteine-binding domain profile. 5 329 IPR003726 -
Tpr6g3534 340 Pfam Homocysteine S-methyltransferase 18 328 IPR003726 -
Tpr6g3534 340 PANTHER ZGC:172121 2 335 - -
Tpr6g3534 340 PIRSF BHMT 276 337 IPR017226 GO:0008168|GO:0008270|GO:0009086
Tpr6g3534 340 PIRSF BHMT 6 248 IPR017226 GO:0008168|GO:0008270|GO:0009086
Tpr6g3534 340 Gene3D - 6 327 IPR036589 -
Tpr6g3534 340 PANTHER HOMOCYSTEINE S-METHYLTRANSFERASE 2 2 335 - -
Tpr6g3534 340 SUPERFAMILY Homocysteine S-methyltransferase 13 331 IPR036589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3534 Tpr-Chr6 38304360 38310101 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3534 K00547 - gmx:100790567 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3534 6 38304360 38310101 Tpr6g3534 6 38304360 38310101 ECH