Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3508 ATGGAAAAATTAATGGATTGGCTTTCAAAGATTTGCACTATTGTGATAATTTTGTTAGGTACCATAATCTATCACGCATTCGCTCTTTCAATTACTTTACACGATGTCGAATGTCTATCAGAAAATGTTCTACATGATGGTGATACAGTTTCAGGAAACTTTGTAGTCATGGATCATGATATATTTTGGAGTTCAGATCATCCTGGAATTGATTTCACTGTGACATCTCCGGAAGGAAATGTGGTGCATTCTTTGAAGGGAACATCAGGGGACAAGTTTGAGTTGAAAGCCACAAAAAGTGGAATTTACAAATTTTGCTTCCACAATCCTATTACTACACCAGAAACTGTCTCCTTTTATCTTCATGTTGGTCACATTCCAAATGAACATGACTTAGCTAAAGATGAGCATTTGGATCCAATTCATGTGAAGATTGCTGAGTTGAGAGAAGCATTAGAATCTATTATAACAGAACAAAAGTACTTGAAAGCACGCGATGCTAGACATCGAAATAGTAAGTTGTTCTTCCTCACTAGTAATTGA 543 0.3591 MEKLMDWLSKICTIVIILLGTIIYHAFALSITLHDVECLSENVLHDGDTVSGNFVVMDHDIFWSSDHPGIDFTVTSPEGNVVHSLKGTSGDKFELKATKSGIYKFCFHNPITTPETVSFYLHVGHIPNEHDLAKDEHLDPIHVKIAELREALESIITEQKYLKARDARHRNSKLFFLTSN* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3508 180 Pfam emp24/gp25L/p24 family/GOLD 34 171 IPR009038 -
Tpr6g3508 180 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 8 172 IPR015720 -
Tpr6g3508 180 PANTHER EMP24/GP25L/P24 FAMILY/GOLD PROTEIN 8 172 - -
Tpr6g3508 180 SMART EMP24_GP25L_2 26 177 IPR009038 -
Tpr6g3508 180 ProSiteProfiles GOLD domain profile. 36 123 IPR009038 -
Tpr6g3508 180 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 43 132 IPR036598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3508 Tpr-Chr6 38009872 38010894 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3508 K20347 - gmx:100789501 281.952