Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3500 ATGCCTTTCACGATGAAGATTCAGCCGATTGATTCTCAGGTTCCGGCTGAGAGGATTAAGCCGGTGGTTAAGTCACGGCTTAAGCGTCTTTTCGAGCGACAATTCTCCGGTGTTCTGAAGAATCCACCGGTGGAGAAGATCGGCGGTGGCGATGAGGTGCATCCACATAATTTCGTCGATTTTGAACCGAGCTCGGTGTGTTTGGCGAAAATGGTGCGGAGTTTCATGGAAGAGAATCATGAGAAGCATTCTGTTTCATGTGCTCGTAACTGCTTCAACGGTAACTTTGATGATAGTTCCGATTCTGAACTTCACCCGCTTGGTGGTGGTGGTGGTGGTGGTTCTTCCGGTGAAGCATACGAAATCCTCAAGGGTTTGGTAGCGTGTCCAAATGTTTATGAAAGAAATTTGTTAGCAGATACAACTAAGATAATTGAGAAGAACAAAACTATGTGCAAACGTAAAGACGATAATTGCAGAAAAATTGTTACTAATGAATTGTTAATTCTTGGATATGATGCTTCAATTTGTAAATCTCGCTGGGAAAAATCCACTTTCTCCATCGCTGGGGAATATGAATACATTGATGTGATGGTGGGAAAAGAGAGGGTGATAATTGACATTGATTTCAGATCAGAATTTGAGGTTGCTCGATCTACAAAGACTTACAAAGCGATTCTCCAAACACTTCCTTATGTATTTGTAGGGAAGAGTGATAGGTTACAGAGTATTGTGGCTATAGCATCTGAAGCAGCGAAACAGAGTTTGAAGAAAAAGGGTTTGCATGTTCCACCTTGGAGAAAACTAGAATATGTTAGATCAAAATGGTTTTCTAGTTATACAAGAATTACACCACCTATGTTTTGTCCTTGGTCAAGGGAAATCAGTGAGGAAACTGAGAGAAAACAGAGGTTTTTGATGGGTGGTGGTGAGTCTGAACTGAGTTGTGATGAATCAGAGTCAAAAGTGTTGGTTGAATGGAAGCCACCAGAATTGAAACCCAAAAATTCTGTTCAGACTGGGGTTAAAGTTGTGACTGGTTTGGCAGCTGTATTTCGTGAAAACCCATGA 1071 0.4155 MPFTMKIQPIDSQVPAERIKPVVKSRLKRLFERQFSGVLKNPPVEKIGGGDEVHPHNFVDFEPSSVCLAKMVRSFMEENHEKHSVSCARNCFNGNFDDSSDSELHPLGGGGGGGSSGEAYEILKGLVACPNVYERNLLADTTKIIEKNKTMCKRKDDNCRKIVTNELLILGYDASICKSRWEKSTFSIAGEYEYIDVMVGKERVIIDIDFRSEFEVARSTKTYKAILQTLPYVFVGKSDRLQSIVAIASEAAKQSLKKKGLHVPPWRKLEYVRSKWFSSYTRITPPMFCPWSREISEETERKQRFLMGGGESELSCDESESKVLVEWKPPELKPKNSVQTGVKVVTGLAAVFRENP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3500 356 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 160 283 IPR006502 -
Tpr6g3500 356 PANTHER OS03G0796600 PROTEIN 22 353 IPR006502 -
Tpr6g3500 356 Pfam PDDEXK-like family of unknown function 70 282 IPR006502 -
Tpr6g3500 356 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 22 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3500 Tpr-Chr6 37884689 37886712 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3500 - - gmx:100796711 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3500 6 37884689 37886712 Tpr1g2067 1 21477593 21479602 PCT