Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3475 ATGAATTCCGATGTTGATCCCGGCGAAATCCCTCCATCGTCGACGACGGCGGAATCATCATCACCGTCATCAATCTTAATCCCTGGTCTTCCAAACGAAGTATCACGAACAATTCTCTCAATGATTCCTTACGCTCATCACGCTCGTTTGAAATCAACTTCAAAATCATGGAAATCAGCACTTTCATCAAAATCATTTCTCAACAATCTCATAAATCATAACCGTAACAATCTTATTTGTATTTTCCCTCAAGATCCTTCAATTCCTAAACCTTATCTTTTCGACGTTAACGCCGTTGCTTGGTGTCCACTTCCACCTATGCCATGTAACCCTCACGTTTACGGTTTATGTAACTTCGCTGCCGTTCCGTTAGGTTTTCATATTTACATAATCGGTGGTTCTCATTTTGATACTCGTTCTTTTCCGATTAATCGTCCTTCGTCTTCTTCGTCGATGTTTCGTTTCAATTTGAGGGATTTTAGTTGGGAGAATCGTGCTTCTATGATTTCGGCACGTGGTAGTTTCGCTTATGCGGTGATTCGTTCCTCTGGTGATAATTCTGGTAATATTGTTGTTGCTGGAGGTGGATCACGGCATATGTTATTTGGTGCTGCTGGATCTCGGATTCGGTTGGTGGAGCGTTATGATGTTGTGGCGGATCGGTGGGAAGAGTTGGAGCCTCTTCCGGGGTTTCGTGCTGGGTGTGTTGGGTTTTTGGAGAGGGAGGAGAGGGAGTTTAGGGTGGTTGGTGGTCATAGTCGTTCGAGGACTGTTTCGGGGGTTTTTCCGGTGGATGAGTATTGTAGGGATGCAGTTGTGATGGGATTGGAGGATGGTGAGTGGCGTCAGGGTGGTGATATGTGGGGTGATTGGGAGAATGTTAGGGCTGGGAAGATGGTTGTTGGTGATGATTGTGGTTCTCCTTTGGTTTTCATGATTGATGTGAATGAGATTTTCAGATATGACATGTCTTCAAATCATTGGGTATATGAGTCTCGTGTGCCAGAAAAAGCTCCCCGTGGTTCGACCTTTGGTATTGTAGTAGTAGCTGGCGAGCTGTATGTATTGACACATTTATATGGTGATGATTTCACAGAAGCCCGAAGGCCCAGACGCTCTAAGAAGACAGGAACTATGTGCTTTCAAATCTATAATCCGAAAAAGAAGGCGTGGAGAACACGGGTCACAAAGTCGCCTTTCCCTTGCCATGTAGATATTAAAAGTCCCGCAGTATTGAGCTCAATTTATCTGTGA 1254 0.4458 MNSDVDPGEIPPSSTTAESSSPSSILIPGLPNEVSRTILSMIPYAHHARLKSTSKSWKSALSSKSFLNNLINHNRNNLICIFPQDPSIPKPYLFDVNAVAWCPLPPMPCNPHVYGLCNFAAVPLGFHIYIIGGSHFDTRSFPINRPSSSSSMFRFNLRDFSWENRASMISARGSFAYAVIRSSGDNSGNIVVAGGGSRHMLFGAAGSRIRLVERYDVVADRWEELEPLPGFRAGCVGFLEREEREFRVVGGHSRSRTVSGVFPVDEYCRDAVVMGLEDGEWRQGGDMWGDWENVRAGKMVVGDDCGSPLVFMIDVNEIFRYDMSSNHWVYESRVPEKAPRGSTFGIVVVAGELYVLTHLYGDDFTEARRPRRSKKTGTMCFQIYNPKKKAWRTRVTKSPFPCHVDIKSPAVLSSIYL* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3475 417 MobiDBLite consensus disorder prediction 1 24 - -
Tpr6g3475 417 SMART kelc_smart 189 240 IPR006652 GO:0005515
Tpr6g3475 417 SMART kelc_smart 127 182 IPR006652 GO:0005515
Tpr6g3475 417 SUPERFAMILY Kelch motif 82 394 IPR015915 GO:0005515
Tpr6g3475 417 Pfam F-box domain 29 66 IPR001810 GO:0005515
Tpr6g3475 417 Pfam Kelch motif 188 229 IPR006652 GO:0005515
Tpr6g3475 417 Pfam Kelch motif 116 168 IPR006652 GO:0005515
Tpr6g3475 417 SUPERFAMILY F-box domain 27 111 IPR036047 GO:0005515
Tpr6g3475 417 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 16 415 - -
Tpr6g3475 417 Gene3D - 71 406 IPR015915 GO:0005515
Tpr6g3475 417 ProSiteProfiles F-box domain profile. 24 70 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3475 - - mtr:MTR_7g096420 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3475 6 37504664 37510003 Tpr6g3475 6 37504664 37510003 ECH