Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3474 ATGCCTTCGGATTCGCTGAACGACGTCGCTTCGTGCTCTTCTGAGACGGAGAAGTTCCTCTGCGACTTGCTGTTGGACTCAACTCAACCCATCTCTGAACGCTTCAGAGCCCTCTTCTCTCTTCGCAACCTCAAAGGTCCCGCTCCTCGCACCGCCCTAATTCAAGCAACTAGAGATTCATCAAATTTGTTAGCACATGAAGCTGCATTTGCATTAGGTCAAATGCAAGAACAGGAAGCCATTCCTGCATTGACCTCGGTTCTTAATGATCTTTCTTTGCATCCCATTGTTCGCCACGAGGCAGCTGAAGCACTTGGTGCTATTGGTTCGGATAGTAACGTTTCTTTGTTGAAACATAGTTTGAATTCTGATCCAGCTCAAGAGGTTCGAGAAACGTGTGAATTGGCTCTTCAACGTATTCTGAATTTAAAACATGATGCTACTAATGATGATTTGACTGCACCTGGTATTTCTCCGTTTAAGTCTGTTGATCCAGCAGCACCGGCCACATCTTGTTCTTCAGTTAATCAACTAAGGGAGTTACTTCTTGACGAGGAAAAAGGGATGTATGAGCGCTATGCAGCTCTTTTCGCACTTCGAAACGATGGTGGAAATGAAGCTGTTGCTGCTATTATTGATTCCTTGGGTTCCAAGAGTGCTTTACTGAAACACGAGGTTGCATATGTTTTGGGCCAATTGCAAAACAAAGCTGCTTCAGCTGCTCTATCCAATATACTTAGAGATGTGAATGAGCACCCAATGGTTAGACACGAGGCTGCTGAAGCTCTTGGTTCAATTGCAGATAACCAAAGCGTAGCCCTTCTTGAGGAGTTTACAGCAGATCCAGAGCCTCTTGTCTCTCAAAGTTGTCAAGTTGCTCTAAGCATGCTAGAATTTGAAAGATCAGGGAAATCATTTGAGTTCCTGTTCATGCGCACTCCAATTGTACATTAA 954 0.4444 MPSDSLNDVASCSSETEKFLCDLLLDSTQPISERFRALFSLRNLKGPAPRTALIQATRDSSNLLAHEAAFALGQMQEQEAIPALTSVLNDLSLHPIVRHEAAEALGAIGSDSNVSLLKHSLNSDPAQEVRETCELALQRILNLKHDATNDDLTAPGISPFKSVDPAAPATSCSSVNQLRELLLDEEKGMYERYAALFALRNDGGNEAVAAIIDSLGSKSALLKHEVAYVLGQLQNKAASAALSNILRDVNEHPMVRHEAAEALGSIADNQSVALLEEFTADPEPLVSQSCQVALSMLEFERSGKSFEFLFMRTPIVH* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3474 317 Gene3D - 9 151 IPR011989 -
Tpr6g3474 317 Gene3D - 161 306 IPR011989 -
Tpr6g3474 317 Hamap Deoxyhypusine hydroxylase [DOHH]. 17 307 IPR027517 GO:0008612|GO:0019135
Tpr6g3474 317 Pfam HEAT repeats 52 137 - -
Tpr6g3474 317 Pfam HEAT repeats 222 294 - -
Tpr6g3474 317 PANTHER DEOXYHYPUSINE HYDROXYLASE 22 303 - -
Tpr6g3474 317 PANTHER PBS LYASE HEAT-LIKE PROTEIN 22 303 - -
Tpr6g3474 317 SMART E-Z type HEAT repeats 253 282 IPR004155 -
Tpr6g3474 317 SMART E-Z type HEAT repeats 220 249 IPR004155 -
Tpr6g3474 317 SMART E-Z type HEAT repeats 31 60 IPR004155 -
Tpr6g3474 317 SMART E-Z type HEAT repeats 62 91 IPR004155 -
Tpr6g3474 317 SMART E-Z type HEAT repeats 95 124 IPR004155 -
Tpr6g3474 317 SMART E-Z type HEAT repeats 189 218 IPR004155 -
Tpr6g3474 317 SUPERFAMILY ARM repeat 95 296 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3474 Tpr-Chr6 37497144 37501211 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3474 K06072 - gmx:100815364 505.368