Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3447 ATGGCTATAACCGCCACCATTTCAGTTCCTATTACATCACCAACTCGTCGCACACTTTCCTCCGTTAATTTCTTTCTCTCTTCTTCTTCGTCCCGATCCATTTCCGCCACACCACAACGCAGTTTCAAATACCCTAATTCCCGCCTCGTTGCTTCATCCATGAAAACCGAAACTCCCGTTAAATCAACAACCTCCACTTCATTCCTTCACCAAAAGGAAACTGGCTTTCTCCATTTCGCTAAATATCACGGTCTCGGAAACGACTTCGTTTTGATTGATAATAGAGACTCTTCCGAACCAAAGATTAGTTCAGAGAAAGCTGTGCAAATATGTGATCGTAACTTTGGTGTTGGTGCTGATGGTGTTATCTTTGTTTTGCCTGGTATTAATGGTACTGACTATACAATGAGGATTTTCAACTCTGATGGTAGTGAGCCTGAGATGTGTGGCAATGGAGTGAGATGCTTTGCCAAATTTGTTTCTCAGCTCGAGAGTTTACATGGGAGACACAGTTTTACCATACACACTGGTGCTGGTCTGATTGTTCCTGAAGTCTTGGAGGATGGAAATGTCAGAGTTGATATGGGAGAACCGATTCTTAAAGCATCAGATGTGCCTACTAAATTATCTCCAAATAAGGATCAAGCTGTTGTTAAAGCAGAGATAGATGTTGATGGAATTATCTGGAATGTTACCTGTGTTAGCATGGGAAATCCACACTGTTTAACCTTCAGCAACAAAGAAACTCAGAATTTGGTTGTTGATGAATTGAAACTAGCCGAAATTGGCCCAAAGTTTGAACATCATGAGATGTTCCCTGCACGAACTAACACAGAGTTTGTGCAAGTTCTTTCTAATTCTCACCTGAAGATGCGTGTTTGGGAGCGTGGTGCAGGAGCAACTCTTGCCTGTGGAACCGGAGCTTGTGCTACAGTTGTTGCAGCCGTTCTTGAGGGTCGTGCTGGGCGGAACTGCACGGTTGATCTACCTGGAGGGCCTCTTCAGATTGAATGGAAGGATGAAGATAATCATGTCTATATGACAGGTTCTGCGGATCTAGTGTATTATGGCTCTTTGCCCCTTTGA 1086 0.4346 MAITATISVPITSPTRRTLSSVNFFLSSSSSRSISATPQRSFKYPNSRLVASSMKTETPVKSTTSTSFLHQKETGFLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQICDRNFGVGADGVIFVLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGLIVPEVLEDGNVRVDMGEPILKASDVPTKLSPNKDQAVVKAEIDVDGIIWNVTCVSMGNPHCLTFSNKETQNLVVDELKLAEIGPKFEHHEMFPARTNTEFVQVLSNSHLKMRVWERGAGATLACGTGACATVVAAVLEGRAGRNCTVDLPGGPLQIEWKDEDNHVYMTGSADLVYYGSLPL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3447 361 Pfam Diaminopimelate epimerase 233 353 IPR001653 GO:0008837|GO:0009089
Tpr6g3447 361 Pfam Diaminopimelate epimerase 79 199 IPR001653 GO:0008837|GO:0009089
Tpr6g3447 361 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 36 360 - -
Tpr6g3447 361 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 36 360 IPR001653 GO:0008837|GO:0009089
Tpr6g3447 361 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 50 208 - -
Tpr6g3447 361 ProSitePatterns Diaminopimelate epimerase signature. 140 154 IPR018510 GO:0005737|GO:0008837|GO:0009089
Tpr6g3447 361 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 212 345 - -
Tpr6g3447 361 SUPERFAMILY Diaminopimelate epimerase-like 220 359 - -
Tpr6g3447 361 SUPERFAMILY Diaminopimelate epimerase-like 77 206 - -
Tpr6g3447 361 TIGRFAM DapF: diaminopimelate epimerase 78 359 IPR001653 GO:0008837|GO:0009089
Tpr6g3447 361 Hamap Diaminopimelate epimerase [dapF]. 77 361 IPR001653 GO:0008837|GO:0009089
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3447 K01778 - gmx:100807528 610.527