Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3438 ATGATCTTTCAATTTCTTTTGCATATATTTGGCTCAGTTTTAAGTGATCTTCAAGGTGGAGTTACAATGAAAATAGAATCCAAAAAATCAAAGTCATGGCCAAAATTAGCCGTGAAGAATTGGCTTAGTACAAAGAACAGTTCTGAAAAGTTTAACTCAGAATACTCTGTTAAAGGCACTTCTACAGAAACAAGAAAGAGTTGTTCAGACCAAGATAGTTACATCCTCGTACCAGATAATTTCTCTGAAGGGTGGTTGAAGCATTCTACAAATGGCATGAAACGTTCGGTGCTTGGGGAGAAAAAACCTCCATCCATCATCACAAATACTCTCAACCTTAGGATGTTTGTGGGGACGTGGAATGTTGGGGGAAAGTCACCAAACAAAGGATTGGACTTAAGGAATTGGCTTACGTCTACTTCGCCAGCTGACATATATGTTATTGGGTTCCAAGAAATTGTACCACTAAATGCTGGGAACGTGCTTGGGTCAGAAAACAGTGGCCCAGCAACAAAGTGGCTGGCCTTTATTCATCAAGCCCTAAACACTACCAACAATGAAAGCCCAAATCAAAACCAACGCTTTAGCTTAGTAGCAAGCAAGCAAATGGTTGGTATTTTCTTGTGTGTGTGGGTACGTGCCGATTTTCGCAACCATGTTAGTCAACTAAAAGTGTCGCGCGTTGGCACCGGCATCATGGGCTATCTCGGAAATAAGGGTTCAATATCGATTAGCATGCGATTATTTCAAACCACGTTTTGCTTCGTTTGCACTCACTTGGCTTCTGGAGAGAAATGTGGTGACGAATTGCGAAGAAATTTGGACATCTCTGAAATCTTGAAGAGAACTAAATTTTGTCACTCGTATAAATCAATTGGTCATTCAGTTCCTCCCGAAAGCATACTAGAACACGATAACATTATTTGGTTGGGCGATTTAAATTATCGACTTGCGGCTGGTTACGACGACATACACGAGCTACTAAAAGAGAATAATTTAAAGGCGTTACTCGAGAAGGATCAACTAAGGATGGAACAGAAAGCTGGAAGAATATTTGATGGTTGGAATGAAGGAAGCATATGCTTTGCACCTACTTACAAATATTTGACCAATTCAGATCAATATGTTGCACAAACCTGTAAATCCAAGGAAAAACGACGCACCCCTGCTTGGTGTGATAGAATTCTATGGAAAGGAGAAGGATTAAATCAGAAAATGTATGTTAGAGGAGAATCAAAATTCTCTGACCATAGACCAGTGTATTCACTATTCACAGCACAGGTTGAAATGACAAACAAGAATCTAACACGTTCTGTTTCTACTACCAATGTCTCAAGATCACCATGTCCCTTAAAACCATTCACAAATTCTTCTTCATTGTCATCTACATGTTGTGCTGCAGCAAAAGTACAAGCAGAAGAACAACTCATGTTACTTGCAACAAGGACACAAAGTTGCATAGATTCTGTTTCAAGATTCTTGTAG 1485 0.396 MIFQFLLHIFGSVLSDLQGGVTMKIESKKSKSWPKLAVKNWLSTKNSSEKFNSEYSVKGTSTETRKSCSDQDSYILVPDNFSEGWLKHSTNGMKRSVLGEKKPPSIITNTLNLRMFVGTWNVGGKSPNKGLDLRNWLTSTSPADIYVIGFQEIVPLNAGNVLGSENSGPATKWLAFIHQALNTTNNESPNQNQRFSLVASKQMVGIFLCVWVRADFRNHVSQLKVSRVGTGIMGYLGNKGSISISMRLFQTTFCFVCTHLASGEKCGDELRRNLDISEILKRTKFCHSYKSIGHSVPPESILEHDNIIWLGDLNYRLAAGYDDIHELLKENNLKALLEKDQLRMEQKAGRIFDGWNEGSICFAPTYKYLTNSDQYVAQTCKSKEKRRTPAWCDRILWKGEGLNQKMYVRGESKFSDHRPVYSLFTAQVEMTNKNLTRSVSTTNVSRSPCPLKPFTNSSSLSSTCCAAAKVQAEEQLMLLATRTQSCIDSVSRFL* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3438 494 Pfam Endonuclease/Exonuclease/phosphatase family 118 417 IPR005135 GO:0003824
Tpr6g3438 494 Gene3D Endonuclease/exonuclease/phosphatase 98 449 IPR036691 -
Tpr6g3438 494 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 186 477 IPR045849 GO:0004445|GO:0046855
Tpr6g3438 494 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 29 188 IPR045849 GO:0004445|GO:0046855
Tpr6g3438 494 Coils Coil 325 345 - -
Tpr6g3438 494 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 29 188 - -
Tpr6g3438 494 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 186 477 - -
Tpr6g3438 494 SMART i5p_5 111 432 IPR000300 GO:0016791|GO:0046856
Tpr6g3438 494 SUPERFAMILY DNase I-like 105 439 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3438 Tpr-Chr6 37140033 37144907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3438 91 437 Acyl Lipid Metabolism Gene Families AT2G43900 29.899 3.84e-45 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3438 - - gmx:100777569 654.44