Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3410 ATGGCGGAGCCACCGCCTCCGCCTCCTTCCCTCACTTCTCTCTGCATCGATGATCTCACTAGACAACTCCTCTCCGGTGATGGTTATGTTGTTCATATTATTCAAGATATATATGAGCTTCCGTCACATTTACTTGATGAATTAATCTCGCGTTTACCTCCTGTTGCATTGTACAATTTCAATCTTCATATGCCATTTCAGGATCTGAATACGGAAGATGTTCCGCACGATGACTCAACAAACAAGAGAAAACGTTTCAGGGATTGGAATCTAAATACAGCCTGGCAGAAGTTGTTTAAGTTGCGGTGGCCTAATATCATTGATCAGATCCAACCAACCGACTGGCAACAAGCATACTGGGAAACCCATTTGCAAAATTGTCTGGATGAAGCAGCAGAGATAGCACTAATCACATCTTTTAAAGGACGTATTGGTGACATACAGATTTCAGACCGAATACTGCGCTATATTGGTTTTGCGAGACTTACAAAACAAAAATACAGTAAATGTTCAAAACTCTCTTATCATTGCCTACAATTTGCCAGCCATGTGAGTTGTCTGACACTGCAGAATGTTCTGTGCACTGCCGAAACTACTCGTTTGTTGAGGGAATGCAAGCTGCAGAGTCTGGTGCTAAGATGTATCCGATCTAAGGAACAGGTTGATGGATTATGCAAACTTATCACTCAACATAGCAGAACATTAAAGTCGCTGGAGTTTATTCACTGCACAGTCTACGTAGATTTTATTAATGCAATACTTGCTTCTGTTGGCATAAAGGGTGTCCCAAAACATGGGATCCAACACCTCTCAATCGTCTCCTCAAGTTTTGGAAAATGCACCGTTTCTTTACCTAGTGGGCTTGAATCATTTTTGTCTTCAGCAAGGTCCCTATGCTCATTAAAACTATTTGACAATCGCCTTGGACGTAATTTTGCAAAAGCTCTTTTTGTGACTCTTCTCGAAGCTTCTTCTAGCATATCTGTCCTTGACCTTTCTGAGAATGAAATAGCGGGATGCCTTTCTTACTTTAACCGGAGACTATCTAGTGGTTCACATCTGTCTGTTGGAATTGGAAAGTCCTTGCAACTGTTGCGTGTGCTCAACCTGAGGGGGAACAATTTACGGAAAGATGACGCAGAAAATCTTGGATATGCTCTTGCGTACATGCCTAACCTGGAGGACCTAGATATAAGTGACAATTCAATTGGGGATGATGGAATCAGGTATTTAACCCCATATTTTGCTGGAACATCTCAAACGTGCTCCCACTTGGCTTGTTTGAATTTAGAGTCTTGTCAACTGTCAGCTGAAGGAGTTAATCATCTTCTAGATTCGCTTCTTACACTCAATGGACCATTGAAGTCTCTTTCCATTGCTGAAAATTACCTTGGGAGCAAAGTAGCAGGTTCTTTGGGAAGATTTTTGAGCACACCTATCGAAGTAGTTGATGTTTCAGGCATTGATTTCCGTCCATCTGGTTTTCAAGAGCTTAACAATATTATACAAGAGCTTCAAAATATGCTTCTGATAAAGGAGGATCTTAAGTTGGTGAAAATTAATATAAGCAAAAACCGTGGTGGGATTGAAACTGCCAAGTTTTTGTCAAAACTCTTGTCACAGGCTCCACAATTAGTTGATGTGAATGCAGCAAGTAATTGTATGCCTATTGAATCACTGCCCATCATCTCTTCTGCATTAAAAATTGCAAAAGGTAATGTTCAGCGTTTGGACTTGACGGGGCATCAATGGGCCTATAAGCCAGAGCATGCTTCACTACGCACTGAATTTGTACATAATGGAAAACCTATATTGATTCTTCCACCGTCATCAGCCACTGCTCCTCCTTGTGACCATGATCCTTAG 1866 0.4126 MAEPPPPPPSLTSLCIDDLTRQLLSGDGYVVHIIQDIYELPSHLLDELISRLPPVALYNFNLHMPFQDLNTEDVPHDDSTNKRKRFRDWNLNTAWQKLFKLRWPNIIDQIQPTDWQQAYWETHLQNCLDEAAEIALITSFKGRIGDIQISDRILRYIGFARLTKQKYSKCSKLSYHCLQFASHVSCLTLQNVLCTAETTRLLRECKLQSLVLRCIRSKEQVDGLCKLITQHSRTLKSLEFIHCTVYVDFINAILASVGIKGVPKHGIQHLSIVSSSFGKCTVSLPSGLESFLSSARSLCSLKLFDNRLGRNFAKALFVTLLEASSSISVLDLSENEIAGCLSYFNRRLSSGSHLSVGIGKSLQLLRVLNLRGNNLRKDDAENLGYALAYMPNLEDLDISDNSIGDDGIRYLTPYFAGTSQTCSHLACLNLESCQLSAEGVNHLLDSLLTLNGPLKSLSIAENYLGSKVAGSLGRFLSTPIEVVDVSGIDFRPSGFQELNNIIQELQNMLLIKEDLKLVKINISKNRGGIETAKFLSKLLSQAPQLVDVNAASNCMPIESLPIISSALKIAKGNVQRLDLTGHQWAYKPEHASLRTEFVHNGKPILILPPSSATAPPCDHDP* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3410 621 SMART LRR_CC_2 390 414 IPR006553 -
Tpr6g3410 621 SMART LRR_CC_2 422 446 IPR006553 -
Tpr6g3410 621 Pfam Leucine Rich repeat 421 441 IPR001611 GO:0005515
Tpr6g3410 621 Pfam Leucine Rich repeat 391 410 IPR001611 GO:0005515
Tpr6g3410 621 SMART LRR_RI_2 390 417 - -
Tpr6g3410 621 SMART LRR_RI_2 514 541 - -
Tpr6g3410 621 SMART LRR_RI_2 422 449 - -
Tpr6g3410 621 SMART LRR_RI_2 362 389 - -
Tpr6g3410 621 Gene3D Ribonuclease Inhibitor 156 339 IPR032675 -
Tpr6g3410 621 SUPERFAMILY RNI-like 352 584 - -
Tpr6g3410 621 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 8 621 - -
Tpr6g3410 621 Gene3D Ribonuclease Inhibitor 340 593 IPR032675 -
Tpr6g3410 621 SUPERFAMILY RNI-like 169 415 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3410 - - gmx:100817679 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3410 6 36812729 36823819 Tpr6g3410 6 36812729 36823819 ECH