Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3394 ATGGCTGATTTAGAAAATTTACTTTTGGAGGCTGCTGGGAGAAACCGACATTCTCTTCCGCCTTTGAGTAAACGGAGTGAATTGGATAGTGGGAGTGGTTCTGATTCTGACTCTGATTCTGATGATGACGAGCATGGTTATCGGGGTAAAAAGCCGACTCAGGTTCCTCTAAAGAAGAGAGGAAGAGAAGATGACAGTGGTGGTGATGACAATGAGGGGGATAGTAGTGAGGAATCTGATGTTGGTGATGATCTTTATAAGGATGAGGATGATAGACAGAAACTTTCTGAGATGACTGAACTTCAAAGAGAGATGATTTTGTCGGATAGGGCTTCTAAGAAGGATGATAAGGATTTTTTGGGTAAGATAGCGTCAAAGCGGGAGAAGGAAAAAAGGGCATCTGTGTCTAGAAGAGAGAGTCCTCCGCCTATTATGTCTTCTCGTGTGCGGACATCTGCCAGATCTGCTGACAGGTCAGCTGCAAAGGATGGTGCATTAAATGAACTGCGTGCTAAGCGGTTGAAACAACAAGACCCAGAAGCGAAACGCAGGATGAATGAGGCGTCTAAAAGTGAAGGACCGGGGCTTTTTTCGCAAAAAGGGAAACATAATATCAGTAGCTCAAGTCATAGTGGAAGTGAAAGTAGGTCTCGTAGTGATGATGAAGGTTCGAATGGAGATGGAGGGATTATTGACAGCGATGATGACAAGATAATGTCTGGACGTGACATGCCTTCCTTTGAGGACATACGGGAAATCACCATTCCCAGGTCAAAACTTGCAAAATGGTTGATGGAGCCATTTTTTGAGGAGTTAATTGTGGGTTGTTTTGTAAGAGTTGGTATTGGTAGGTCAAAGACTGGGCCTATCTACAGGCTCTGTATGGTGAAAAATGTTGATGCCTCAGATCCTAACCGGTTGTATAAATTAGATAATAAAACCACATACAAGTACTTGAATGTTGTATGGGGAAATGAAACTTCTGCTGCGAGGTGGCAAATGGCTATGGTTAGCGATTCTCCCCCGGTTGAGGAGGAGTTTAAACAGTGGGTTAAGGAAGTAGAGCGAAGTGGTGGCCGGATGCTGATGAAGCTAGATGTGATGGAAAAAAAGAAAGCCTTACAGAAAATCAATAATTTTGTTTACTCTGCAGCTACTGTGAAGCAGATGTTAGAGGAAAAGAAATCTACCTCACGGAGGCCACTAAATGTTGCAGCTGAGAAGGATCGGTTGAAAAGGGAATTGGAAATAGCAGAAAGCAAAAAAGATGCAGCTGCAGTAGAGAATATCAAGACAAGACTGCAAGAGCTGGAGGAGTCACGGAAAGTTCGGGAGAAGGATGCCAAGGCTTTGAGGCTTTCTGAGATGAACAGAAAGAACAGGTTTGAGAACTTCAAAAATGCATCTGAAATGAAGCCAGTAAATAAAGCTTTGAAAGCAGGGGAGGCAGGTTATGATCCCTTTTCAAGGAGATGGACTAGATCAAGGAACTACTATAATTCAAAACCGGCTGAAGAGGCTGCAGCTGAAAATAATAGTTCTGGGGATGCAGTTGGTGATGGAGGCAACAATGGGACGGGAACTGGTATGGTGGCCACTGCCGAGGCTTTGGAAGCTGCTGCTGGGGCTGGGAAGTTAGTAGACACAAGTGCTCCAGTGGATCAAGGGACGGAGTCATATGTACTGCACGATTTTGAGCTGCCAATATCACTAGCCTTACTCCAAAAGTTTGGTGGAGCACAGGGAGTTCATGCAGGGTTTATGGCAAAAAAGCAGAGAATTGAAGAAACCGTTGGATTTCGGGTCCCAGAAAACGATGGAAGGAGTCATCTGCTGACATTAACAGTTAGTGATTACAAAAGAAGAAGGGGACTTCTTTAA 1881 0.4418 MADLENLLLEAAGRNRHSLPPLSKRSELDSGSGSDSDSDSDDDEHGYRGKKPTQVPLKKRGREDDSGGDDNEGDSSEESDVGDDLYKDEDDRQKLSEMTELQREMILSDRASKKDDKDFLGKIASKREKEKRASVSRRESPPPIMSSRVRTSARSADRSAAKDGALNELRAKRLKQQDPEAKRRMNEASKSEGPGLFSQKGKHNISSSSHSGSESRSRSDDEGSNGDGGIIDSDDDKIMSGRDMPSFEDIREITIPRSKLAKWLMEPFFEELIVGCFVRVGIGRSKTGPIYRLCMVKNVDASDPNRLYKLDNKTTYKYLNVVWGNETSAARWQMAMVSDSPPVEEEFKQWVKEVERSGGRMLMKLDVMEKKKALQKINNFVYSAATVKQMLEEKKSTSRRPLNVAAEKDRLKRELEIAESKKDAAAVENIKTRLQELEESRKVREKDAKALRLSEMNRKNRFENFKNASEMKPVNKALKAGEAGYDPFSRRWTRSRNYYNSKPAEEAAAENNSSGDAVGDGGNNGTGTGMVATAEALEAAAGAGKLVDTSAPVDQGTESYVLHDFELPISLALLQKFGGAQGVHAGFMAKKQRIEETVGFRVPENDGRSHLLTLTVSDYKRRRGLL* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3394 626 Gene3D - 244 377 IPR036128 GO:0003677
Tpr6g3394 626 MobiDBLite consensus disorder prediction 214 243 - -
Tpr6g3394 626 Pfam Plus-3 domain 249 354 IPR004343 GO:0003677
Tpr6g3394 626 Coils Coil 408 454 - -
Tpr6g3394 626 ProSiteProfiles Plus3 domain profile. 244 379 IPR004343 GO:0003677
Tpr6g3394 626 SUPERFAMILY Plus3-like 246 377 IPR036128 GO:0003677
Tpr6g3394 626 MobiDBLite consensus disorder prediction 1 243 - -
Tpr6g3394 626 MobiDBLite consensus disorder prediction 68 85 - -
Tpr6g3394 626 MobiDBLite consensus disorder prediction 503 526 - -
Tpr6g3394 626 PANTHER UNCHARACTERIZED 1 626 - -
Tpr6g3394 626 MobiDBLite consensus disorder prediction 155 189 - -
Tpr6g3394 626 MobiDBLite consensus disorder prediction 41 67 - -
Tpr6g3394 626 PANTHER PLUS-3 DOMAIN PROTEIN 1 626 - -
Tpr6g3394 626 SMART rtf1 244 356 IPR004343 GO:0003677
Tpr6g3394 626 MobiDBLite consensus disorder prediction 86 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3394 Tpr-Chr6 36635309 36637850 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3394 K15178 - gmx:100818650 787.334