Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3392 ATGGATACAAAAGAAGAAGCAGAAGCTAATGAGGATAGACCTTCATCACCAATGTGGGTTCTACAACAGTTATCTGAAGGAGCATTTAGAGTTGCTGGAGAAGCATTGCAGGATATGTTCTCTGGTGGTGGTGGGTTAAGTGTGCCACAGATAGGGTCTAGTGGTGGTGGTGGTGGTGGTGGACATAGGAGATGTCAAAGTGAACTTGTTAGTAAAGGATTTCAACGTAGTGATAGTTTTCAGAAGTTAAAAGCTCGTGTGCATAAGGCTTGGGGTTGGGGTGGAAAATCAAGGGAAGAAGGTTTATCGCCGAGTTTTAATCCGGAGATTATGGCAAACCAGAAACGTCAGTGGTATCAGCTTCATCCCAAATCTATGGATTGTTTAAATTATAAGGAGCCAACCTCGCTCTTTGAACATTTTGTGATTGTGGGGCTGCATCCAGATGCTAATTTGGAAGTTGTGGAGCATGCATTTGCAAGAAGGAAGAAATGGGAAAGAGAGAAGGAAACCTATGAACATCTCGATTACAGAATGGCGCAGCAACAAAGACCGCCAGAACCTACTTTGGAGCCTCAGATACTGTTCAAATATCCTCCTGCAAGGAGGCTAACAGTGCGTTTGAAGGATTTAGCCTCCTTTTGTTTTCCTGAAGGTGTTAAGGCATCTTTGGTGGAGAGGACTCCATCTCTAAGTGAACTAAACGAAATTGTCTACGGACAGGAACATTTAGGCAGAGATGATCTATCATTTGTCTTTACACTCAAGGAAGCAGACAATACAACACTTTATGGAGTTTGCTTACATGTGCCTGAAATTGTTCAGAGACCCCCTGGTATCTTAGGCGGCACATCATCTCCTCTTTCTCTTCCTTCTGGGCTAGGCAGCCGTTTTCTAGTTTCTGCACCTCGCTGTTACTGTCTTCTAACCAAAGTTCCTTTCTTTGAGTTACACTTTGAGATGTTAAATAGTCTCATTGCACAGGAGCGTCTGAACCGGATTACTCAGTTTGTAAATGAGTTTTCTCTTTCTGGTTGCATTCCATCGATGCCCAAACTAGATGATCAATCGAGTTCATATACTAACTCCCCAGACCGGGAATCATTTAGCGACTGGATGACTTGCGCAATACCTATTGATGATGCAGCTATCATTACTGCTGCTGCTGCTGGAATTATACCCGATGATGAGATTCCTCAGTTATCACCCAAAACATGGGATTCTCGCTGTCATTCCCCTTTAAGTGTGAGTGCCAGTGATGCTTCGGATGTTTGTCAGCTTAGGGAAATAGATAAGGATGGCAAGAAGTATCTACAAGATCATGATACATGTTCTTTTGAGGGACCAGAAACTCATGATTCTGTGGAAAGAACATATGGAAATGGTGAATGTGGACAACTTTCTCCCAGTGTTGTAACACCATCTGCTCGGTGTCGTAGCCTTGGAAGTTCTGAGTCAATTTTCAGTCCAGCTAGAAGCATTGTATCGGAAGATGAGTGTCATCCTTTTTCAAACAATGAAAGAGATAACGAAGATGATTTGTCAATGGAATGGGCTATGGACCGTAAGAATGATTTACTACAGATAGTGTGCAGATATCATGCTCAAGCTATTCCACCTCGAGGAAGTGAATTCGTCTTCCACCCTCTTGAACATTTACAAGCTATTCAATATTTAAGACATTCAGTTGTTTCTCTTGGCTTCAGAGAAAATTGTTTAGATTGTTCCGACTCAGCTGAGGTTAATGCGAAGTTGGTAGCTGCTGAGGAAGCCCTTGCGTTATCTGTATGGACAATGTCAACTACTTGTCGAGTTCTATCCCTTGATAGGTTGCTGGCATTAGTTACTGGAGTGTTATTGGAAAAACAAGTTGTAATATTGTGCCCAAATTTGGGTGTTCTATCTGCAGTAGTGCTTTCTCTTATACCCATGATTCGTCCATTTCAATGGCAGAGTTTACTGCTCCCGGTTTTGCCTGCAAAAATGATCGATTTTCTTGATGCACCGGTTCCATATATTGTTGGCATACAACATAAACCAGATGATTTGAATATGAAAACTACTAATCTTGTTGTAGTTAATGTAATGAAAGATCAGGTTAAAATGTGTCACTTGCCTAGACTTCCACAGCAAAGAGACCTTCTTTCTCAGTTGGGTCCAATTCATGCAAAACTTTCACGTGAAAGTTCAATTGCTAGAAAGCATCCTATACATAGGTGCAACGAAGTTCAGGCTGAAACTGCAACTAAGTTTTTGAATATCATGTGGCACTATTTGGAGTCGCTTTGTTCAAATTTGAAATCGCATACGATAACTAGTGTACAATCAAATCACGACAGGGTTTCTTTACTTCTTAAAGATAGCTTCATTGATTCCTTTCCTATTAGGGACCAGCCATTTATGAAGCTATTTGTAGATACACAGCTTTTCACCGTTTTATCAGATTCTTGTCTATCAAGCTTTGAGAGTGGCAATTCATAA 2481 0.4123 MDTKEEAEANEDRPSSPMWVLQQLSEGAFRVAGEALQDMFSGGGGLSVPQIGSSGGGGGGGHRRCQSELVSKGFQRSDSFQKLKARVHKAWGWGGKSREEGLSPSFNPEIMANQKRQWYQLHPKSMDCLNYKEPTSLFEHFVIVGLHPDANLEVVEHAFARRKKWEREKETYEHLDYRMAQQQRPPEPTLEPQILFKYPPARRLTVRLKDLASFCFPEGVKASLVERTPSLSELNEIVYGQEHLGRDDLSFVFTLKEADNTTLYGVCLHVPEIVQRPPGILGGTSSPLSLPSGLGSRFLVSAPRCYCLLTKVPFFELHFEMLNSLIAQERLNRITQFVNEFSLSGCIPSMPKLDDQSSSYTNSPDRESFSDWMTCAIPIDDAAIITAAAAGIIPDDEIPQLSPKTWDSRCHSPLSVSASDASDVCQLREIDKDGKKYLQDHDTCSFEGPETHDSVERTYGNGECGQLSPSVVTPSARCRSLGSSESIFSPARSIVSEDECHPFSNNERDNEDDLSMEWAMDRKNDLLQIVCRYHAQAIPPRGSEFVFHPLEHLQAIQYLRHSVVSLGFRENCLDCSDSAEVNAKLVAAEEALALSVWTMSTTCRVLSLDRLLALVTGVLLEKQVVILCPNLGVLSAVVLSLIPMIRPFQWQSLLLPVLPAKMIDFLDAPVPYIVGIQHKPDDLNMKTTNLVVVNVMKDQVKMCHLPRLPQQRDLLSQLGPIHAKLSRESSIARKHPIHRCNEVQAETATKFLNIMWHYLESLCSNLKSHTITSVQSNHDRVSLLLKDSFIDSFPIRDQPFMKLFVDTQLFTVLSDSCLSSFESGNS* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3392 826 Pfam DENN (AEX-3) domain 597 696 IPR001194 -
Tpr6g3392 826 PANTHER BNAA09G10210D PROTEIN 25 823 - -
Tpr6g3392 826 Gene3D - 125 349 - -
Tpr6g3392 826 Pfam uDENN domain 192 270 IPR005113 -
Tpr6g3392 826 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 25 823 - -
Tpr6g3392 826 ProSiteProfiles Tripartite DENN domain profile. 173 824 IPR037516 -
Tpr6g3392 826 SMART DENN_cls 301 698 IPR001194 -
Tpr6g3392 826 SMART uDENN_cls 134 271 IPR005113 -
Tpr6g3392 826 Gene3D - 594 761 IPR043153 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3392 Tpr-Chr6 36616816 36627341 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3392 - - gmx:100791254 1245.72