Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3387 ATGGAGAGTGACGTGAGAAGTTTGAAATGGGCTTCAATTCAGAGACTTCCAACTGTTGCACGTTTGAGGAGAGGTTTATTGACTACCCCTCAAGGAGATACCAATGAAATTGACGTTCACAATATTGGCTTGCAAGAAAGAACTTATTTGCTTCAAAGACTCGTCAAGAATAATATTAACACCGACGACGGCGGCGACGATGATGACGTGAACAATGATCAAAATAGTTCCTTGTTGAAGCTTATGAGAGATCGCATTGATAGAGCTGGAGTTGATATTCCTACAATTGAAGTTCGATTTGAGCACTTGAATGTCCAATCACATGTTCAAGTAGGAAAGAGAGCTTTGCCTACAATCACTAACTACATGCTTGACATTCTAGAGGCTCCGTTGAACTATATACTAAAAAGAAGAAAACCAAATTTGAATATTCTACAAGATGTCAGCGGAATAATAAAGCATAGCAGGATGACATTGCTTTTAGGCCCTCCAAGTTCTGGAAAGACCACACTCCTCTTGGCCTTAGCTGGAAAACTTGATCCCAACTTAAAGGTTATTCATTTGCGTAATGAGGTGCAATTTTATGAACAGTTCACTGGAAAAGTGAGTTATAATGGTCATGAGATGAATGAATTTGTACCCCAAAGAACTGCTGTTTATGCCAGTCAAAAGGATATTCACCTTGGAGAATTGACAGTCAGAGAAACCTTGGCCTTCTCAGCAAGAGTTCAAGGCGTTGGACCTCGATATGATATACTAGCAGAGGTGTGTAGAAGAGAGAAAGAGGAAAACATTATCCCTGATCCAGATATTGATGTCTATATGAAGGCCGTTGCAACCGAGGACCAAAGAGCAAATATTGTAACGGAGTATATTTTAAAGATTTTGGGACTGGATATCTGCGGAGATACTATGTTAAAAGGCATCTCTAAAGGACAAAGGAAATGTGTTACAATAGGAGAGATGCTGGTAGGACCAATTAAAGCTTTATTCATGGATGAAATATCTATTGGTTTGGATGATTCGACGACCTTTCAAATTGTGAAATCATTGAAGCAATTTGTCCACCTAGTCAAAAGAACTGCTGTGATCTCACTACAACAGCCATCACTAGAGACTTTCAATCTTTTTGATGACATCATTTTACTCTCTGATGGACACATTGTGTACCAAGGTCCTTGTGAACAAGTGCTTGGTTTTTTTGCTTCAATGGGTTTTATATGTCCCGAGAGGAAAACTGTTGTAGACTTTTTGCAAGAAGTGACATCAAGGAAAGATCAGGAACAATATTGGATACAAAAAGAAAATCCTTATAGATTTGTGACAGCTAAAGAGTTTGCGGACGCATTTGAGTCATATCATGTTGGGAGAAGCCTTTGTAATGAACTTGCTACTCAATTTGACAAGTCTAAAAGCCATCCATCTGCTTTGACAACCAAAAAGTATGGCATTGGAAAATGGGACTTATTCAAAGCGTGCTTATCAAGAGAATATTTACTCATGAAGCGTAATTCACTTTACTATATCTTCAAACTTTGCCAAATTGCTTTGGTCGCCATCATCACCATGACTGTTTTCCTACCAACTCGAATGCATCATGATTCAGTAGCCGATGGAGGCATTTATGCTGGTGCATTGTTATATGGAAGTACTGTACTTATGTTGAATGGATTTGCTGAACTTGCTATGATGGTTGTGAGGCTTCCTGTGTTTTATAAGCAAAGAGACTTACTTTTTTTCCCTTCATGGGCATATGCTGTTCCGTCGTGGATCCTAAAAATCCCCATAAGTTTTGCAGAAGTTGGTGTTTGGGTATCCTTCACCTATTCTATCATTGGTGATCCAAATGCTGTTGGAAGGACGTTCCTTCTTCTAGTGCTTGTCAACCAAATGGCTACTTTGTTTTGCCGATTAGTTGCTGCAATTAGTAGAGAAATGGCAATGGCCGCGACTCTTGGGACTTTTTCATTGGGAATGCTTCTTGTTGCGGTGTCAAAAGGTATCATAAAGACAAAGATAATTGTACTCTTGTTCTATATGCTTACAGACAATATACGAAAGTGGTGGTTATGGGAATTCTGGATATCACCTACTATGTATGGACAAAATGCCTTGTTGAATAACGAATTCCATGGGAAGACGTGGAGACATGTTCCACCTAACTCAACGGAACCTCTAGGAGTTCAAATTTTGAAATCTCGCGGCTTCTTTACTCAGTCCTACTGGTATTGGATAGGTTTTGGGGCATTGATTGGATACACGTTATTGTTCGTCTTTGGTCACATTCTTGCGCTCACTTACTTGAACCAAATTGATTATGCAGCACTTAAAGAACATCAGGTTGTTAAATCCGCTCAGTCGTTATCCAGGAAGCAACAATCTGTAAGGGATAGTAAACAAAACCAGAAGAGAGGAATGGTTCTTCCTTTTGAACCACAATATATCACCTTTGAAGACGTGACATATTCAGTTGATATGCCACAGGAAATGAAGAATCAGGGAGTTATTGGGGATAGGTTGAACCTTTTGAAGGGTGTTAGTGGTGCTTTCAGGTCAGGTGTTCTAACAGCACTAATGGGTGCGACTGGTGCTGGCAAAACAACTATGATGGATGTGCTTTCTGGTAGAAAAACTGGTGGATATATTGGTGGGAACATCACAATTTCTGGCTATCCAAAGAATAAGGAAAGCTTTGCTAGAATTTGTGGATACTGTGAACAAAATGATATCCACTCTCCCTATGTTACTGTATATGAATCATTGCTCTTTTCAGCATGGCTCCGATTGTCTGCAGAAATAAATGCTGAAACCAGGAAGATGTTCGTCGAGGAAGTTATGGAGCTCGTGGATCTGACCCCACTAAGGGATACAATTGTTGGATTGCCGGGTGCTAATGGACTTTCGACGCAACAGTGCAAAAGGTTGACTATTGCAGTTGAGTTAGTGGCCAATCCTTCTATTATATTCATGGACCAACCAACTTCTGGACTAGATGCAAGATCGGTCGCAATTGTTATGAGAGCAATTAGAAATATAGTGGACAACGGAAGAACAGTTGTTTGTGCCATTCATCAACCCAATATTGATATTTTTGAATCTTTTGATGAGCTGTTCTTGATGAAGCAAGGAGGGCAAGTGATATACGCGGGACCAATTGGACATCATTCTTCCGACTTAATAAGTTACTTTGAGGGGATTCAACGCGTCAGTAAGTTTGAAGATGGCTGTAACCCAGCAACTTGGATGTTGGAAGTCACTTCTCCAGAAAAAGAAATGGAATTGGGGATCGATTTTGCTGAGGTGTACAAGAATTCAGAATTATACAGGAGAAACAAAGATCTTATTTCAGAATTGAGCATTCCTGCTCCTGATTCTGAGAATCTTCATTATCCTTCAAAGTACTCAAGGTCCCTTTTCACTCAATGCAAGGCTTGTTTATGGAAACAACATTGGTCTTACTGGCGTAATTCGCGATACAATGGATTAAGGTTTCTCTTCACAACTGTTGCCTCCACCTTTCTCGGGTGCATGTTTTTTGGCATTGGCTCCAAAATGGAAAAGCAACAAGATCTCCTTAACTCCATTGGCTCAATGTTGATCACTATTCTACTTATCGGTATCAAGAATGCAAATTCGGCGCAAGCAGTGGTAAGTACAGAGAGAGTGGTGTTCTATAGGGAAAATTCTGCAGGAATGTATTCTTCTCTAGCATATGCTGTTGGTCAGGCTCTAATTGAAATCCCTTATGTTCTTTTACAAGCTTTGATCTATGGAACTATAATTTATGCAATGGTTGGTTTTAAGTGGAGTGTGGCTAATTTTTTTTGGTACATATTTTTTATTTTCTTCATCTCTTTATACTTTACCTACTATGGTATGATGTTAGTAGCCATGACCCGAAACCAAACCATTGCCTCTTTCCTTACCCGTCCGTCTTATGTATTATGGAGTCTTTTCTCAGGATCCGTAATTCCACCACCAAAAATTCCAATATGGTGGAGATGGTTTTATTGGGCAAATCCAGTAGCATGGAGTTATAATGGATTGGTGACTTCACAATTTGGAGGTATAAAAGATCATATTGAATCTAAGGGAAAAAGTGTTTCAGTAGAAGATTTTTTGGAAAATTACTACGGTTTCCGACATGATTGCTTGGGAGTAGTTGCAGCTGTAGTTGTTGGATTCACATTGACTTTTGTATTGGTTTTTGTCTTGTCTATCAAGATGTTTAATTTCCGATCGCGCTAA 4248 0.3945 MESDVRSLKWASIQRLPTVARLRRGLLTTPQGDTNEIDVHNIGLQERTYLLQRLVKNNINTDDGGDDDDVNNDQNSSLLKLMRDRIDRAGVDIPTIEVRFEHLNVQSHVQVGKRALPTITNYMLDILEAPLNYILKRRKPNLNILQDVSGIIKHSRMTLLLGPPSSGKTTLLLALAGKLDPNLKVIHLRNEVQFYEQFTGKVSYNGHEMNEFVPQRTAVYASQKDIHLGELTVRETLAFSARVQGVGPRYDILAEVCRREKEENIIPDPDIDVYMKAVATEDQRANIVTEYILKILGLDICGDTMLKGISKGQRKCVTIGEMLVGPIKALFMDEISIGLDDSTTFQIVKSLKQFVHLVKRTAVISLQQPSLETFNLFDDIILLSDGHIVYQGPCEQVLGFFASMGFICPERKTVVDFLQEVTSRKDQEQYWIQKENPYRFVTAKEFADAFESYHVGRSLCNELATQFDKSKSHPSALTTKKYGIGKWDLFKACLSREYLLMKRNSLYYIFKLCQIALVAIITMTVFLPTRMHHDSVADGGIYAGALLYGSTVLMLNGFAELAMMVVRLPVFYKQRDLLFFPSWAYAVPSWILKIPISFAEVGVWVSFTYSIIGDPNAVGRTFLLLVLVNQMATLFCRLVAAISREMAMAATLGTFSLGMLLVAVSKGIIKTKIIVLLFYMLTDNIRKWWLWEFWISPTMYGQNALLNNEFHGKTWRHVPPNSTEPLGVQILKSRGFFTQSYWYWIGFGALIGYTLLFVFGHILALTYLNQIDYAALKEHQVVKSAQSLSRKQQSVRDSKQNQKRGMVLPFEPQYITFEDVTYSVDMPQEMKNQGVIGDRLNLLKGVSGAFRSGVLTALMGATGAGKTTMMDVLSGRKTGGYIGGNITISGYPKNKESFARICGYCEQNDIHSPYVTVYESLLFSAWLRLSAEINAETRKMFVEEVMELVDLTPLRDTIVGLPGANGLSTQQCKRLTIAVELVANPSIIFMDQPTSGLDARSVAIVMRAIRNIVDNGRTVVCAIHQPNIDIFESFDELFLMKQGGQVIYAGPIGHHSSDLISYFEGIQRVSKFEDGCNPATWMLEVTSPEKEMELGIDFAEVYKNSELYRRNKDLISELSIPAPDSENLHYPSKYSRSLFTQCKACLWKQHWSYWRNSRYNGLRFLFTTVASTFLGCMFFGIGSKMEKQQDLLNSIGSMLITILLIGIKNANSAQAVVSTERVVFYRENSAGMYSSLAYAVGQALIEIPYVLLQALIYGTIIYAMVGFKWSVANFFWYIFFIFFISLYFTYYGMMLVAMTRNQTIASFLTRPSYVLWSLFSGSVIPPPKIPIWWRWFYWANPVAWSYNGLVTSQFGGIKDHIESKGKSVSVEDFLENYYGFRHDCLGVVAAVVVGFTLTFVLVFVLSIKMFNFRSR* 1416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3387 1415 SMART AAA_5 852 1044 IPR003593 -
Tpr6g3387 1415 SMART AAA_5 154 387 IPR003593 -
Tpr6g3387 1415 Gene3D - 814 1062 IPR027417 -
Tpr6g3387 1415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 831 1052 IPR027417 -
Tpr6g3387 1415 Pfam Plant PDR ABC transporter associated 715 772 IPR013581 -
Tpr6g3387 1415 Pfam ABC-transporter N-terminal 61 121 IPR029481 -
Tpr6g3387 1415 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 2 1415 - -
Tpr6g3387 1415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 425 IPR027417 -
Tpr6g3387 1415 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 129 410 IPR003439 GO:0005524
Tpr6g3387 1415 Pfam ABC transporter 145 334 IPR003439 GO:0005524
Tpr6g3387 1415 Pfam ABC transporter 843 995 IPR003439 GO:0005524
Tpr6g3387 1415 ProSitePatterns ABC transporters family signature. 309 323 IPR017871 GO:0005524
Tpr6g3387 1415 Pfam ABC-2 type transporter 1140 1354 IPR013525 GO:0016020|GO:0140359
Tpr6g3387 1415 Pfam ABC-2 type transporter 489 710 IPR013525 GO:0016020|GO:0140359
Tpr6g3387 1415 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 815 1068 IPR003439 GO:0005524
Tpr6g3387 1415 Gene3D - 131 451 IPR027417 -
Tpr6g3387 1415 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 2 1415 - -
Tpr6g3387 1415 CDD ABCG_PDR_domain2 812 1050 IPR034003 -
Tpr6g3387 1415 Pfam ABC-2 type transporter 368 450 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3387 Tpr-Chr6 36542935 36550783 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3387 K08711 - mtr:MTR_7g098890 2173.67