Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3385 ATGGAGAGTGGTACTGATGTTGAGGGAAGATTCAGAGGAAGCAGTAAGAGAAGTATCAGGTTTAACAGTTCATCATCACTAAGCATCAGCAGTGAGGCGGATAATATCTTCCCTAACTCTGTTAATAGGGAGGACAATGATGATGAAGAGGCTTTGAAATGGGCTGCAATTCAAAGGCTTCCAACTGTTAGACGTTTGAGGAGAGGTTTGTTGATTACCTCTGAAGGAGTGGTTAGTGAAATTGATATACACAAACTTGGGATGCAAGAAAGGAAATATTTGCTAGAAAGATTAGTGAGAATTGCTGATATCGACAATGAAAAATTATTATTGAAATTAAGGGGTCGCTTGAACAGAGTTGGAATGGAGATGCCTACGATCGAAGTTCGATTTGAGCACATGAAGATCGAAGCAGAAGTTCACATAGGAAAAAGAGCTTTGCCTACCCTCACTAATTACGCGCTTGATATGGTAGAGGCTCCATTTAACTATATACTAAGAAGAAGAAGACAAAAAGTGAACATTCTCAAGAATGTTAGTGGAATAATAAAACCTGGCAGGATGACATTGCTGTTAGGCCCTCCAAGTTCTGGAAAAACGACACTCCTTTTGGCCTTAGCTGGAAAACTTGATCCCAAGCTAAAGTTCTCTGGGAAGGTGACTTATAATGGTCATGAGATGAATGAATTTGTACCTCAAAGAACTGCTGCTTATGTCAGTCAAAACGATCTTCACATTGGCGAATTGACAGTTAGAGAAACTTTGGAATTCTCAGCAAGATTCCAAGGTGTTGGGCTTAGATATGATATGCTAGAAGAAGTATCAAGAAGAGAAAAAGAGAGAAACATTATCCCTGATCCAGATATTGATGTCTTTATGAAGGCTATTGCAACTGCGGGCCAGAAATCAAATCTTGTAATAGATTATTATTTAAAGATTTTGGGACTAGAGACCTGTGCAGATACTGTGGTGGGAAATGCAATGTTAAGAGGTGTCTCTGGAGGACAAAGGAAACGGGTTACGACAGGGGAGATGCTAGTAGGAACAGCTAAGGCTCTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACTTTTCAAGTTGTGCAATCAGTGAGGCAGTCTGTCTACCATCTCAATGGAACTGCTGTTATCTCACTCCTGCAGCCACCACCAGAGACTTACGATCTTTTTGACGACATTATTCTACTCTCTGAGGGGCACATTGTGTACCTGGGTCCTTGTGAACACGTGCTTGAATTTTTTGCTTCATTAGGTTTCATGTGTCCAAAAAGAAAATCTGTGGCAGACTTTTTACAAGAAGTGACATCAATGAAAGATCAGGAGCAATATTGGGCAGAAAGAGGGAAGCCTTATAGATTTGTAACACCTAGAGAGTTTGCGGAGGCATTTCAGTCATTTCATGCCGGGAGAAACCTTGGTAATGAACTTGCTACTCAATTTGACAAGTCTAAAAGTCACCCAGCTGCTTTGGCGACTAACAAGTATGGAACTGAAAAGTGGGAATTGTTCAAAGCTTGCTTATCAAGAGAACTTTTACTGATGAAGCGCAATTCATTTATATATAAATTCAAACTTTACCAAGTAGGTTCTAACAATTTGAACATTATAGTATTTCACTATGTATATGCTATTCTATTACTAATACATTTCCCCTTCTTCAAGCTTGCTGCGATGGCTATCATTACCATGACCGTTTTTCTCCGAACTGAAATGCACCATGATTCAGTGATTGACGGCGGCATATATGCCGGTGCATTGTTCTATGGAAATATGGTGCTTTTATTTAATGGATTTGCTGAACTTTCAATGACTGTTGCGAGGCTTCCAGTCTTTTACAAGCATAGGGACATGCTCTTCTACCCTTCTTGGGCATATGGTATTCCTTCATGGATCCTTAAAATTCCCATAACATTGGCTGAAGCAGTTGTTTGGATAGCCCTCACCTATTTTGTCATCGGTTACGATCCTGAAGTTGGAAGATTATTTAGACAATTCCTTCTTCTCATAATTATCAACCAAATGGGTACCGGACTATTCCGATTTCTTGGAGCAGTTGGTAGAGAAATGACAGTAGCTCTAACACTTGCGTCATTTATGTTGTGCTTCTTCATTGCCATGGGTGGTCTGGCCCTCTCGAGAGATGATATAAAAACAGGGTGGATATGGGGATTCTGGATATCGCCTATAATGTATGCTCAAAATGGCTTAGTGAATAACGAGTTCCTAGGGAAGACATGGAGACATGTTCTTCCTAACTCAACAGACCCGCTAGGAGTTGAAGTTTTGAAATCCCGTGGGTTCTTTACAGAGCCGTACTGGTATTGGATATGTTTCGGGGCATTGATTGGATATACATTATTGTTCAACTTGGGTTACATTCTTGCTCTAACATACTTAAATTCAATTGAAAAGCATCAGGTTGTGAAATCAGAGCAATCTCAAAGCAGTGAAGAGAATGGTCGAAGTAAAAGTGGAATGGTTCTTCCTTTTGATCCACATTGTATAACTTTTGATGAGGTCTCATATTCTGTAGACATGCCTCAGGAAATGAGGAGTCAGGGTGTCCTTGAAGATAAGTTGGTTCTTTTGAATGGTGTTAGCGGAGCTTTTAGACCAGGTGTTCTCACTGCACTAATGGGTGTCACCGGTGCCGGAAAAACAACTTTGATGGATGTACTTGCTGGTAGGAAAACTGGGGGATATATTACTGGAAACATCACAATTTCTGGCTATCCTAAAAACCAAGAAACCTTTGCAAGAATTTCTGGATACTGTGAACAAAATGATATACACTCTCCTCATATTACTATCTATGAATCCTTGCTCTATTCAGCATGGCTCCGATTGCCGGAGGAAATCAATACAGAAACTAGGAAGGTGTTCGTGGAGGAAGTCATGGAGCTAGTTGAGCTGACCCCACTTAGGGATGCATATGTTGGTCTCCCTGGTATTATCGGTCTCTCAACTGAACAGCGTAAAAGATTGACTATTGCAGTTGAGCTGGTGGCTAATCCTTCTATCATATTCATGGATGAACCAACTTCTGGGCTAGATGCAAGAGCTGCAGCTATTGTTATGAGAGCAGTTAGGAACATAGTAGACACCGGAAGAACAATTGTGTGTACCATTCACCAGCCCAGCATTGATATCTTTGAATCTTTCGACGAGCTTTTCTTAATGAAACGAGGAGGACAAGAGATATATGTGGGGCCACTAGGACGTCATTCTTCACATTTAATTAACTACTTTGAGGGAATTCAAGGTGTCAGTAAGATTAAAGATGGCTACAACCCATCAACTTGGATGTTGGAAGTTACAAGTTCAGCAAAAGAAATGGAAATGGAGATTAATTTTGCTGAGGTGTACAGAAGTTCAGAATTGTACAGGAGAAACAAAGCTATTATTGAAGAATTGAGCACTCCATATCCTGGTTCAAAGAGCCTTTATTTTCCTTCGAAGTACTCGAGGTCCTTTTTTACCCAATGTATGGCTTGTTTATGGAAACAACATTGGTCTTACTGGCGCAATCCGTTGTACAATTCAATAAGGTTTATCTTCACAATCGCTGTTGCCTTGTTGCTTGGGGGCATGTACTGGAAAGTTTCCTCCAAAATGTAA 3648 0.4035 MESGTDVEGRFRGSSKRSIRFNSSSSLSISSEADNIFPNSVNREDNDDEEALKWAAIQRLPTVRRLRRGLLITSEGVVSEIDIHKLGMQERKYLLERLVRIADIDNEKLLLKLRGRLNRVGMEMPTIEVRFEHMKIEAEVHIGKRALPTLTNYALDMVEAPFNYILRRRRQKVNILKNVSGIIKPGRMTLLLGPPSSGKTTLLLALAGKLDPKLKFSGKVTYNGHEMNEFVPQRTAAYVSQNDLHIGELTVRETLEFSARFQGVGLRYDMLEEVSRREKERNIIPDPDIDVFMKAIATAGQKSNLVIDYYLKILGLETCADTVVGNAMLRGVSGGQRKRVTTGEMLVGTAKALFMDEISTGLDSSTTFQVVQSVRQSVYHLNGTAVISLLQPPPETYDLFDDIILLSEGHIVYLGPCEHVLEFFASLGFMCPKRKSVADFLQEVTSMKDQEQYWAERGKPYRFVTPREFAEAFQSFHAGRNLGNELATQFDKSKSHPAALATNKYGTEKWELFKACLSRELLLMKRNSFIYKFKLYQVGSNNLNIIVFHYVYAILLLIHFPFFKLAAMAIITMTVFLRTEMHHDSVIDGGIYAGALFYGNMVLLFNGFAELSMTVARLPVFYKHRDMLFYPSWAYGIPSWILKIPITLAEAVVWIALTYFVIGYDPEVGRLFRQFLLLIIINQMGTGLFRFLGAVGREMTVALTLASFMLCFFIAMGGLALSRDDIKTGWIWGFWISPIMYAQNGLVNNEFLGKTWRHVLPNSTDPLGVEVLKSRGFFTEPYWYWICFGALIGYTLLFNLGYILALTYLNSIEKHQVVKSEQSQSSEENGRSKSGMVLPFDPHCITFDEVSYSVDMPQEMRSQGVLEDKLVLLNGVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTGGYITGNITISGYPKNQETFARISGYCEQNDIHSPHITIYESLLYSAWLRLPEEINTETRKVFVEEVMELVELTPLRDAYVGLPGIIGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNIVDTGRTIVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGRHSSHLINYFEGIQGVSKIKDGYNPSTWMLEVTSSAKEMEMEINFAEVYRSSELYRRNKAIIEELSTPYPGSKSLYFPSKYSRSFFTQCMACLWKQHWSYWRNPLYNSIRFIFTIAVALLLGGMYWKVSSKM* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3385 1215 Pfam ABC transporter 873 1025 IPR003439 GO:0005524
Tpr6g3385 1215 Pfam ABC transporter 176 358 IPR003439 GO:0005524
Tpr6g3385 1215 Pfam Plant PDR ABC transporter associated 756 818 IPR013581 -
Tpr6g3385 1215 MobiDBLite consensus disorder prediction 1 15 - -
Tpr6g3385 1215 Gene3D - 844 1088 IPR027417 -
Tpr6g3385 1215 PANTHER ATP-BINDING CASSETTE TRANSPORTER 558 1214 - -
Tpr6g3385 1215 PANTHER ATP-BINDING CASSETTE TRANSPORTER 21 539 - -
Tpr6g3385 1215 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 845 1097 IPR003439 GO:0005524
Tpr6g3385 1215 Pfam ABC-transporter N-terminal 103 152 IPR029481 -
Tpr6g3385 1215 MobiDBLite consensus disorder prediction 1 28 - -
Tpr6g3385 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 433 IPR027417 -
Tpr6g3385 1215 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 160 433 IPR003439 GO:0005524
Tpr6g3385 1215 CDD ABCG_PDR_domain2 842 1080 IPR034003 -
Tpr6g3385 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 868 1081 IPR027417 -
Tpr6g3385 1215 Pfam ABC-2 type transporter 391 444 IPR043926 GO:0140359
Tpr6g3385 1215 Pfam ABC-2 type transporter 512 751 IPR013525 GO:0016020|GO:0140359
Tpr6g3385 1215 SMART AAA_5 882 1074 IPR003593 -
Tpr6g3385 1215 SMART AAA_5 185 418 IPR003593 -
Tpr6g3385 1215 Gene3D - 162 464 IPR027417 -
Tpr6g3385 1215 CDD ABCG_PDR_domain1 157 415 IPR034001 -
Tpr6g3385 1215 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 558 1214 - -
Tpr6g3385 1215 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 21 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3385 Tpr-Chr6 36528917 36537155 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3385 K08711 - gmx:100813417 1725.68