Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3384 ATGGCGATGGCGATGGAGGGTGGAGATAGTTTTAGGATTGGTAGTTCATCAATTTGGAGGAACACTGATGCTGATGAGATTTTTTCAAATTCTTTTCACCAACAAGATGATGATGAAGAGGCTCTTAAATGGGCTGCGATTCAGAAACTTCCTACGTTTGCTCGTTTGAAGAAAGGTTTGCTTACTTCACTTCAAGGTGAAGCCACTGAGATCGATATCGAGAAACTTGGGTTGCAAGAAAGAAAAGATTTGCTTGGAAGACTCGTTAGACTTGCTGAAGAGGACAATGAAAAGTTTTTGCTTAAACTCAAGGATCGAATTGACAGAGTTGGAATTGATCTTCCTACGATAGAGGTTCGATTCGAGCACTTGAATATCGAAGCAGAAGCTCGTGTAGGAAGCAGATCTTTGCCAACCTTCACTAACTTCATGGTTAATATAGTTGAGGGACTATTGAACTCTCTTCATGTAATTCCAAGTAGAAAACAACATTTAAATATTCTGAAGGATGTTAGTGGAATAATAAAGCCTTCAAGAATGACATTGCTTTTGGGCCCTCCAAGTTCTGGAAAAACTACACTCTTGTTGGCCTTGGCTGGAAAACTTGATCCAACATTGAAGTTTTCTGGAAAGGTTACTTATAATGGTCATCAGATGAATGAGTTTGTGCCCCAGAGAACTTCTGCATATGTAGATCAACATGATCTTCACATTGGAGAAATGACTGTTAGAGAAACCCTGGCCTTCTCAGCAAGAGTCCAAGGAGTCGGGCCTCGTTATGACTTGCTAGCTGAACTGTCCAGAAGAGAAAAACAAGCAAATATCATACCCGATCCAGATATTGATGTGTACATGAAGGCTATAGCTACTGAAGGCCAGAAGACAAATTTGATAACAGATTACGTACTAAGGGTTTTGGGATTAGAGATCTGTGCTGATACTTTTGTAGGAAATGCAATGGTAAGAGGTATTTCTGGGGGACAAAGGAAACGCGTTACAACAGGGGAGATGTTGGTTGGACCGTATAAAGCTCTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACTTTTCAAATTGTGAATTCAATGAAGCAATATGTCCACATTCTCAAAGGAACCGCGGTTATCTCACTCCTGCAGCCACCGCCAGAGACTTACAATCTTTTTGATGACATTATTCTACTCTCTGATAGTCACATTATATACCAGGGTCCTCGTGAGCACGTACTTGAATTTTTTGAATCAATCGGTTTTAAATGTCCTAACAGGAAAGGAGTGGCAGATTTTTTGCAAGAAGTGACATCAAGGAAAGATCAAGAGCAGTACTGGGAACACAAGGAACAACCTTATAGATTTGTCACAGCTGAAGAGTTTTCTGATGCATTTCAATCGTTTCATGTTGGCATAAGACTTGGTGATGAACTTGGTACTGAATTTGACAAGTCTAAGAGCCATCCATCTGCCTTGACAACCAAGAAATATGGCGTGGGACAATGGGAACTGTATAAAGCTCTCTTATCAAGAGAATATTTACTTATGAAGCGCAATTCATTTGTCTACATTTTCAAGCTTTGCCAACTATCTATAATGGCAATTGTTACGATGACTATCTTCTTCCGGACTGAGATGCACAGAGATTCTGTGACTCATGGAGGCATATATGTAGGTGCATTGTTCTATGGTGTTGTAGTGATAATGTTCAATGGATTGGCTGAAATTTCCATGGTAGTTTCAAGGCTTCCTGTTTTCTACAAGCAAAGGGGATACCTCTTTTATCCTCCATGGGCATTTGCTCTTCCTGCATGGATCCTAAAAATCCCTTTGACTTTTGTGGAAGTTGCTGTTTGGGTATTCCTCACCTATTATGTCATTGGTTTTGATCCATATATTGGAAGATTTTTCAGACAATACCTTATTCTTGTACTAGTAAACCAGATGGCTTCTGGATTATTCAGATTCATTGCAGCAGTTGGGAGAGATATGACAGTTGCTTTAACATTTGGATCATTTGTAATTGCCAACCTTTTTGCCATGAGTGGTTTTGTCCTATCAAAAGATAGTATAAAAAAATGGTGGATATGGGGATTTTGGATATCACCTATGATGTATGGACAAAATGCCATGGTTAATAATGAGTTCCTTGGTAATAACTGGAAACATGTTCTTCCCAACTCAACGGAGCCACTAGGAGTTGAAGTTTTGAAATCTCGCGGGTATTTCACCGAGTCATACTGGTACTGGATTGGTGTGGTTGCTTTGATTGGATATACATTAGTTTTCAACTTTGGCTATATCCTTGCTCTCACTTTCTTGAATTCACTTGGAAAGCATCAAACTGTTATTCCAGAGGAATCTCAAAACAATGAGCAAAATGGTGATAGCAGAAAAAGAACTAACGTATTGAAGTTCATAAAGGATAACTTTTCACAGCACTCAAATAGAGTGAGAAACGGCGAATGTACAAGTGGAAGCATCTCTCCTAGTACTTTATCTAGTGGACAGGAAACTGTTGCTGCAGAGACAAATCATAGTAGGAAACGAGGAATGGTTCTTCCTTTTGAACCACATTCAATCACCTTTGATGAAGTTACATATTCTGTTGACATGCCGCAGGAAATGATAAACCGAGGTTTTGTTGAGGATAAGTTGGTTCTTTTGAAAGGTGTCAGTGGAGCTTTCAGACCAGGTGTTCTCACTGCTCTAATGGGTGTGACTGGTGCTGGCAAAACAACTCTGATGGATGTGCTCGCTGGTAGAAAAACTGGTGGGTATATCGAGGGGACCATCACAATTTCTGGTTATCCAAAGAAGCAAGAAACCTTTGCAAGGATTTCTGGATACTGTGAGCAAAATGATATTCACTCTCCTCATGTTACTGTCTATGAGTCCTTAGTCTATTCAGCATGGCTCCGATTGTCCCCTGACATCAATGCTGAAACCCGGAAGATGTTCATTGAGGAAGTTATGGAACTTGTGGAATTGAAACCACTAAGAAACGGATTAGTAGGACTGCCTGGTGTTAGCGGTCTCTCAACAGAGCAGCGCAAAAGGTTGACTATTGCAGTTGAGTTGGTAGCCAATCCGTCTATAATATTCATGGATGAGCCAACTTCTGGGCTAGATGCAAGGGCTGCAGCTATTGTGATGAGAACAGTTAGGAACACAGTAGACACCGGAAGAACAGTTGTTTGTACCATCCACCAGCCTAGCATTGATATATTTGAATCGTTTGATGAGCTTTTGCTACTTAAGCAAGGAGGGCAAGAGACTTATATGGGGCCACTTGGACATCATTCTTCTAATTTAATCGGTTATTTTGAAGGAATCGAAGGTGTAAGCAAAATTAAAGACGGCTATAATCCAGCAACATGGATGTTGGAAGTCACAACTTCATCTAAAGAAGTGGAATTGGGGATTGATTTTGCAGAAGTGTACAAAAATTCAGAATTATACGGGAGAAACAAAGCACTTATCAAAGAATTGAGTACTCCAGCTTCTGGCTCAAAAGATCTTTATTTTCATTCACAGTACTCAAGATCGTTTTTGACACAATGCATGGCTTGCTTATGGAAACAACATTGGTCTTATTGGCGCAATCCTCTATATACCGCCATAAGATTTCTGTACTCAACCGTGGTAGCTGTTTTGCTTGGAACCATGTTTTGGAACCTTGGCTCCAAAATTGAAAAGGAACGAGATCTTTTTAATGCCATGGGGTCCATGTATGCTGCTGTTCTCTTAATTGGCATAAAAAATTCAACTTCGGTGCAGCCAGTGGTTTCTGTAGAACGAACGGTCTTTTATAGAGAAAGAGCAGCCGGAATGTATTCAGCTTTCCCATATGCATTTGGTCAGGTTGTAATTGAGCTTCCATATGTTTTTGTACAATCTGCGGTCTATGGATTTATAGTTTATGCTATGATTGGTTTTGAGTGGAATGTGGCTAAAGTTTTGTGTTTCCTATTCTTCATGTATTTCACCTTCCTCTACTTCACCTTCTTTGGCATGATGGCAGTTTCCGTGACCCCAAACAACCACATTTCGACTATAGTTTCCTCTGCATTCTATACCTTATGGAATCTTTTCTCAGGATTCGTAATCCCAAGACCAAGGATTCCAGTGTGGTGGAGGTGGTACAGTTGGATAAATCCAATGGCTTGGAGTTTGTATGGATTAGTGGCTTCACAATATGGAGATATAAAACACAACATTGATACCAATGATGGAAGACAAACAGTAGAAGGTTTTGTGAGAAATTACTTTGGTTTCAAGCATGATTTTCTAGGAGTGGTTGCTATTGTTAATGTTGCATTTCCAATAGCTTTTGCTTTGGTCTTTGCCGTATCAATCAAGATGTTCAATTTCCAAAGGCGTTAA 4386 0.399 MAMAMEGGDSFRIGSSSIWRNTDADEIFSNSFHQQDDDEEALKWAAIQKLPTFARLKKGLLTSLQGEATEIDIEKLGLQERKDLLGRLVRLAEEDNEKFLLKLKDRIDRVGIDLPTIEVRFEHLNIEAEARVGSRSLPTFTNFMVNIVEGLLNSLHVIPSRKQHLNILKDVSGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPTLKFSGKVTYNGHQMNEFVPQRTSAYVDQHDLHIGEMTVRETLAFSARVQGVGPRYDLLAELSRREKQANIIPDPDIDVYMKAIATEGQKTNLITDYVLRVLGLEICADTFVGNAMVRGISGGQRKRVTTGEMLVGPYKALFMDEISTGLDSSTTFQIVNSMKQYVHILKGTAVISLLQPPPETYNLFDDIILLSDSHIIYQGPREHVLEFFESIGFKCPNRKGVADFLQEVTSRKDQEQYWEHKEQPYRFVTAEEFSDAFQSFHVGIRLGDELGTEFDKSKSHPSALTTKKYGVGQWELYKALLSREYLLMKRNSFVYIFKLCQLSIMAIVTMTIFFRTEMHRDSVTHGGIYVGALFYGVVVIMFNGLAEISMVVSRLPVFYKQRGYLFYPPWAFALPAWILKIPLTFVEVAVWVFLTYYVIGFDPYIGRFFRQYLILVLVNQMASGLFRFIAAVGRDMTVALTFGSFVIANLFAMSGFVLSKDSIKKWWIWGFWISPMMYGQNAMVNNEFLGNNWKHVLPNSTEPLGVEVLKSRGYFTESYWYWIGVVALIGYTLVFNFGYILALTFLNSLGKHQTVIPEESQNNEQNGDSRKRTNVLKFIKDNFSQHSNRVRNGECTSGSISPSTLSSGQETVAAETNHSRKRGMVLPFEPHSITFDEVTYSVDMPQEMINRGFVEDKLVLLKGVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTGGYIEGTITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVYSAWLRLSPDINAETRKMFIEEVMELVELKPLRNGLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLLKQGGQETYMGPLGHHSSNLIGYFEGIEGVSKIKDGYNPATWMLEVTTSSKEVELGIDFAEVYKNSELYGRNKALIKELSTPASGSKDLYFHSQYSRSFLTQCMACLWKQHWSYWRNPLYTAIRFLYSTVVAVLLGTMFWNLGSKIEKERDLFNAMGSMYAAVLLIGIKNSTSVQPVVSVERTVFYRERAAGMYSAFPYAFGQVVIELPYVFVQSAVYGFIVYAMIGFEWNVAKVLCFLFFMYFTFLYFTFFGMMAVSVTPNNHISTIVSSAFYTLWNLFSGFVIPRPRIPVWWRWYSWINPMAWSLYGLVASQYGDIKHNIDTNDGRQTVEGFVRNYFGFKHDFLGVVAIVNVAFPIAFALVFAVSIKMFNFQRR* 1462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3384 1461 CDD ABCG_PDR_domain1 154 407 IPR034001 -
Tpr6g3384 1461 Gene3D - 154 464 IPR027417 -
Tpr6g3384 1461 Pfam ABC-transporter N-terminal 92 143 IPR029481 -
Tpr6g3384 1461 MobiDBLite consensus disorder prediction 820 844 - -
Tpr6g3384 1461 SMART AAA_5 177 409 IPR003593 -
Tpr6g3384 1461 SMART AAA_5 898 1090 IPR003593 -
Tpr6g3384 1461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 424 IPR027417 -
Tpr6g3384 1461 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 861 1113 IPR003439 GO:0005524
Tpr6g3384 1461 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 5 1461 - -
Tpr6g3384 1461 Pfam ABC-2 type transporter 383 461 IPR043926 GO:0140359
Tpr6g3384 1461 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 152 425 IPR003439 GO:0005524
Tpr6g3384 1461 CDD ABCG_PDR_domain2 858 1096 IPR034003 -
Tpr6g3384 1461 Gene3D - 857 1102 IPR027417 -
Tpr6g3384 1461 MobiDBLite consensus disorder prediction 820 842 - -
Tpr6g3384 1461 PANTHER ATP-BINDING CASSETTE TRANSPORTER 5 1461 - -
Tpr6g3384 1461 Pfam ABC-2 type transporter 1186 1400 IPR013525 GO:0016020|GO:0140359
Tpr6g3384 1461 Pfam ABC-2 type transporter 504 716 IPR013525 GO:0016020|GO:0140359
Tpr6g3384 1461 Pfam Plant PDR ABC transporter associated 721 784 IPR013581 -
Tpr6g3384 1461 Pfam ABC transporter 168 350 IPR003439 GO:0005524
Tpr6g3384 1461 Pfam ABC transporter 889 1041 IPR003439 GO:0005524
Tpr6g3384 1461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 881 1093 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3384 Tpr-Chr6 36499451 36507565 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3384 K08711 - gmx:732607 2469.5