Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3382 ATGGAGGGTGGAGGTAGTTTTAGGATTGGAAGTTCATCAATTTGGAGGAACACTGATGCTGATGAGATTTTTTCAAATTCTTTTCACCAAGAAGATGATGAAGAAGCTCTTAAATGGGCTGCAATTCAGAATCTTCCTACTTTTGCGCGTTTGAGGAAAGGTTTGCTCACTTCACTTCAAGGTGAAGCTATTGAGATTGATATCGAGAAACTTGGGTTGCAAGAAAGAAAAGATTTGCTTGGAAGACTTGTTAGACTTGCTGAAGAGGACAATGAAAAGTTTTTGCTCAAACTCAAGGATCGAATCGACAGAGTTGGTGTTGATCTTCCTACGATAGAGGTTCGATTCGAGCACTTGAATATCGAAGCAGAAGCTCATGTAGGAAGCAGATCTTTACCTACCTTCACTAATTTCTGGGTTAATATAGTTGAGGGACTATTGAACTCTCTGCATGTACTTCCAAGTAGAAAACAACACCTAAATATTCTCAGGAATGTTAGTGGAATAATAAAGCCTTCAAGAATGACATTGCTTTTGGGTCCTCCAAGTTCTGGAAAAACCACACTCCTGTTGGCCTTGGCTGGAAAGCTTGATCCAAAATTGAAGTTTTCTGGAAAGGTGACTTATAATGGGCACGAGATGAATGAGTTTGTGCCGCAAAGAACTTCTGCTTATGTGGATCAACATGATCTTCACATTGGAGAAATGACTGTCAGAGAAACCTTGGCCTTCTCAGCAAGAGTCCAAGGAGTCGGGCCTCGTTATGACTTGCTAGCTGAATTGTCCAGAAGAGAAAAACATGCAAATATCATGCCTGATCCAGATATTGATGTGTACATGAAGGCTATAGCAACTGAAGGCCAAAAGACTAATTTGATAACAGATTATGTCCTAAGGGTTTTGGGATTAGAGATTTGTGCTGATACTTTAGTAGGAAATGCAATGGTAAGAGGTATTTCTGGGGGACAAAGGAAACGCGTCACAACGGGGGAGATGTTGGTTGGACCTAATAAAGCACTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACTTTTCAAATTGTGAATTCAATGAAACAATATGTTCACATTCTCAAAGGAACCGCGGTTATCTCACTCCTGCAGCCACCACCAGAGACTTACAATCTTTTTGATGACATTATTCTACTTTCTGATAGTCAAATTATATATCAAGGTCCCCGCGAGAACGTGCTTGAATTTTTCGAATCAATGGGTTTTAAATGTCCTAACAGGAAAGGAGTGGCAGATTTTTTGCAAGAAGTGACATCAAGGAAAGATCAAGAGCAGTACTGGGAACACAAGGATCAGCCTTATAGATTTGTCACAGCTGAAGAGTTTTCTGAGGCATTTCAATCATTTCATGTTGGCATAAGACTTGGTGATGAACTTGGTACTGAATTTGACAAGTCTAAGAGCCATCCATCTGCCTTGACAACCAAGAAATATGGCGTGGGACAATGGGAACTGTATAAAGCTCTCTTATCAAGAGAATATTTACTCATGAAGCGCAATTCATTTGTCTACATCTTCAAGCTTTGCCAACTGTCTTTAATGGCAATTGTTGCGATGACCATCTTCTTACGGACTGAGATGCACAGAGATTCCGTGACTCATGGAGGCATATATGTAGGTGCATTGTTCTTTGGTGTTGTAGTGATAATGTTCAATGGAATGGCTGAAATTTCCCTGGTAGTTTCAAGGCTTCCTGTTTTCTACAAGCAAAGGGGATACCTCTTTTATCCTCCATGGGCATTTGCTCTTCCTTCATGGATCCTAAAAATCCCTTTGACTTTGGTGGAAGCTGCTGCTTGGGTATTCCTCACTTATTATGTCATTGGTTTTGATCCATATATTGGAAGATTTTTCAGACAATACCTTATTCTTGTACTAGTACACCAGATGGCTTCTGCATTATTCAGATTCATTGCAGCAATCGGGAGAGATATGACAGTTGCTTTAACATTTGGATCATTTGTACTTGCCATCCTTTTTGCTATGAGTGGTTTTGTCCTATCAAAAGACAGTATAAAAAAAGGGTGGATATGGGGATTTTGGATATCACCTATGATGTATGGACAAAATGCCATGGTCAATAATGAGTTCTTTGGTAATAGCTGGAAACATGTTCTTCCTAACTCAACGGAGCCACTAGGAGTTGAAGTTTTGAAATCTCGCGGGTATTTCACCGAGTCATACTGGTACTGGATTGGTGTGGTTGCTTTGATTGGATATACATTAGTTTTCAACTTTGGCTATATCCTTGCTCTCACTTTCTTGAATCCACTCGGAAAGCATCAAACTGTTATTCCGGAGGAATCTCAAAACAATGAGGAAAATGGTGGTAGCAGAAAAAGAACTAATGTATTGAAGTTCATAAAGAATAGCTTTTCCCAGCACTCAACTAGAGTGAAAAACGGTGAATGTACAAGTGGAAGCGTCTCTCCTAGTACTTTATCTAGTAGACAGGAAACAGTTGCGGCAGAGACAAATCATAGTAGGAAAAGAGGAATGGTTCTTCCTTTTGAACCACATTCAATCACCTTTGATGATGTTACGTATTCTGTAGGCATGCCGCAGGAAATGAAAAACCGAGGTTTTGTTGAGGATAAGTTAGTTCTTTTGAAAGGTGTCAGTGGAGCTTTCAGACCAGGTGTTCTCACTGCTCTAATGGGGGTGACTGGTGCTGGAAAAACAACTTTGATGGATGTGCTCTCTGGTAGAAAAACTGGTGGATATATCGATGGGAACATTACAATTTCTGGCTATCCAAAGAAGCAAGAAACCTTTGCAAGAATTGCTGGATACTGTGAGCAAAATGATATCCACTCTCCTTATGTTACTGTCTATGAGTCCTTGCTCTATTCAGCATGGCTCCGATTGTCCCCCGACATCAATGCTGAAACCCGGAAGATGTTCATTGAGGAAGTTATGGAACTTGTGGAATTGAAACCACTACGAAACGCATTAGTAGGACTTCCTGGTGTTAGCGGTCTCTCGACAGAGCAGCGCAAAAGGTTGACTATTGCAGTTGAGTTGGTAGCCAATCCTTCTATAATATTCATGGATGAGCCAACTTCTGGGTTAGATGCAAGGGCTGCAGCTATTGTGATGAGGACAGTTAGGAACACAGTAGACACCGGAAGAACAGTTGTTTGTACCATTCACCAGCCTAGTATCGATATATTTGAATCTTTTGATGAGCTTTTGCTACTTAAGCAAGGAGGGCAAGAGATATATGTGGGGCCACTTGGACATCATTCGTCCAATTTAATTGGTTACTTCGAAGGAATCCAAGGTGTTAGAAAAATTAAAGACGGTTATAATCCAGCAACATGGATGTTGGAAGTCACAACTTCATCTAAAGAAGTGGAATTGGGGATTGATTTTGCACAAGTCTACAAAAATTCAGAATTATACGGGAGAAACAAAGTACTTATCAAAGAATTGAGTAATCCAGCTTCTGGTTCAAAAGATCTTTATTTTCTATCACAGTACTCAAGATCCTTTTTGACACAATGCATGGCTTGTTTATGGAAACAACATTGGTCTTATTGGCGTAATCCTCTATATACCTCCATAAAACTTTTGTACTCAACCTTGGTAGCTGTTTTGCTTGGAACAATGTTTTGGAACCTTGGCTCTAAAATTGAAAAGGAGCAAGATCTTTTTAATGCCATGGGATCCATGTATGCTGCTGTTCTCTTAATTGGCATAAAAAATTCTACCTCAGTGCAGCCAGTGGTTTCTGTAGAACGAACGGTCTTTTATAGAGAAAGAGCAGCCGGAATGTATTCTGCTTTCCCATATGCATTTGGTCAGGTTGTAATCGAGCTTCCATATGTCTTTGTACAAACTGTGGTCTATTGCTTTATAGTTTATGCTATGATTGGTTTTGAGTGGAATGTGGCTAAAGTTTTGTGGTGTCTATTCTTCATGTATTTCACCTTCCTCTACTTCACCTTCTATGGTATGATGTCAGTGGCCATGACCCCAAACAGCCACATTTCCACTATAGTTTCCTCTGCATTCTATGCTGTATGGAATCTCTTCTCAGGATTCATAATCCCTAGACCAAGGATTCCAGTGTGGTGGAGGTGGTACAGTTGGATAAATCCAGTGGCTTGGAGTTTGTATGGATTAGTGGCTTCACAATATGGAGATATAAAACACAACATTGATACCAATGATGGAAGACAAACAGTAGAAGGTTTTCTCAGAAATTACTTTGGTTTCAAGCATGATTTTCTAGGAGTGGTTGCTATTGTTAATGTTGCATTTCCAATAGCTTTTGCTTTGGTCTTTGCCATATCAATCAAGATGTTTAATTTCCAAAGGCGTTAA 4371 0.3988 MEGGGSFRIGSSSIWRNTDADEIFSNSFHQEDDEEALKWAAIQNLPTFARLRKGLLTSLQGEAIEIDIEKLGLQERKDLLGRLVRLAEEDNEKFLLKLKDRIDRVGVDLPTIEVRFEHLNIEAEAHVGSRSLPTFTNFWVNIVEGLLNSLHVLPSRKQHLNILRNVSGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPKLKFSGKVTYNGHEMNEFVPQRTSAYVDQHDLHIGEMTVRETLAFSARVQGVGPRYDLLAELSRREKHANIMPDPDIDVYMKAIATEGQKTNLITDYVLRVLGLEICADTLVGNAMVRGISGGQRKRVTTGEMLVGPNKALFMDEISTGLDSSTTFQIVNSMKQYVHILKGTAVISLLQPPPETYNLFDDIILLSDSQIIYQGPRENVLEFFESMGFKCPNRKGVADFLQEVTSRKDQEQYWEHKDQPYRFVTAEEFSEAFQSFHVGIRLGDELGTEFDKSKSHPSALTTKKYGVGQWELYKALLSREYLLMKRNSFVYIFKLCQLSLMAIVAMTIFLRTEMHRDSVTHGGIYVGALFFGVVVIMFNGMAEISLVVSRLPVFYKQRGYLFYPPWAFALPSWILKIPLTLVEAAAWVFLTYYVIGFDPYIGRFFRQYLILVLVHQMASALFRFIAAIGRDMTVALTFGSFVLAILFAMSGFVLSKDSIKKGWIWGFWISPMMYGQNAMVNNEFFGNSWKHVLPNSTEPLGVEVLKSRGYFTESYWYWIGVVALIGYTLVFNFGYILALTFLNPLGKHQTVIPEESQNNEENGGSRKRTNVLKFIKNSFSQHSTRVKNGECTSGSVSPSTLSSRQETVAAETNHSRKRGMVLPFEPHSITFDDVTYSVGMPQEMKNRGFVEDKLVLLKGVSGAFRPGVLTALMGVTGAGKTTLMDVLSGRKTGGYIDGNITISGYPKKQETFARIAGYCEQNDIHSPYVTVYESLLYSAWLRLSPDINAETRKMFIEEVMELVELKPLRNALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLLKQGGQEIYVGPLGHHSSNLIGYFEGIQGVRKIKDGYNPATWMLEVTTSSKEVELGIDFAQVYKNSELYGRNKVLIKELSNPASGSKDLYFLSQYSRSFLTQCMACLWKQHWSYWRNPLYTSIKLLYSTLVAVLLGTMFWNLGSKIEKEQDLFNAMGSMYAAVLLIGIKNSTSVQPVVSVERTVFYRERAAGMYSAFPYAFGQVVIELPYVFVQTVVYCFIVYAMIGFEWNVAKVLWCLFFMYFTFLYFTFYGMMSVAMTPNSHISTIVSSAFYAVWNLFSGFIIPRPRIPVWWRWYSWINPVAWSLYGLVASQYGDIKHNIDTNDGRQTVEGFLRNYFGFKHDFLGVVAIVNVAFPIAFALVFAISIKMFNFQRR* 1457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3382 1456 CDD ABCG_PDR_domain1 154 402 IPR034001 -
Tpr6g3382 1456 Pfam ABC transporter 884 1036 IPR003439 GO:0005524
Tpr6g3382 1456 Pfam ABC transporter 163 345 IPR003439 GO:0005524
Tpr6g3382 1456 Gene3D - 856 1098 IPR027417 -
Tpr6g3382 1456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 871 1092 IPR027417 -
Tpr6g3382 1456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 420 IPR027417 -
Tpr6g3382 1456 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 147 420 IPR003439 GO:0005524
Tpr6g3382 1456 SMART AAA_5 172 404 IPR003593 -
Tpr6g3382 1456 SMART AAA_5 893 1085 IPR003593 -
Tpr6g3382 1456 CDD ABCG_PDR_domain2 853 1091 IPR034003 -
Tpr6g3382 1456 MobiDBLite consensus disorder prediction 813 836 - -
Tpr6g3382 1456 Pfam ABC-2 type transporter 378 456 IPR043926 GO:0140359
Tpr6g3382 1456 Gene3D - 149 458 IPR027417 -
Tpr6g3382 1456 Pfam Plant PDR ABC transporter associated 716 779 IPR013581 -
Tpr6g3382 1456 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1 1456 - -
Tpr6g3382 1456 Pfam ABC-2 type transporter 499 711 IPR013525 GO:0016020|GO:0140359
Tpr6g3382 1456 Pfam ABC-2 type transporter 1181 1395 IPR013525 GO:0016020|GO:0140359
Tpr6g3382 1456 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 1456 - -
Tpr6g3382 1456 MobiDBLite consensus disorder prediction 813 841 - -
Tpr6g3382 1456 Pfam ABC-transporter N-terminal 87 138 IPR029481 -
Tpr6g3382 1456 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 856 1108 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3382 Tpr-Chr6 36470642 36478648 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3382 K08711 - gmx:732607 2459.1