Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3377 ATGATGGAGGGTGGAGGTAGTTTTAGGATTGATAGTTCATCAATTTGGAGGAACACTGATGCTGCTGAGATTTTTTCAAATTCTTTTCATCAAGAAGATGATGAAGATGCTCTTAAATGGGCTGCAATTCAGAAACTTCCTACTTTTGCGCGTTTGAGGAAAGGTTTGCTTACTTCACTTCAAGGTGAAGCCACGGAGATCGATATTGAGAACCTTGGGTTGCAAGAAAGAAGAGATTTGCTTGAAAGACTTGTTAGACTTGCTGAAAAGGACAATGAGGAGTTTTTGCTCAAACTCAAGAATCGAATTGACAGAGTTGGAATTGATCTTCCTACGATAGAGGTTCGATTTGATCACTTGAATATCGAAGCAGAAGCTCATGTCGGAAGCAGATCTTTGCCTACCTTCACTAACTCCATGGTTAATATAGTTGAGGGCCTATTGAACTCTCTGCATGTACTTCCAAGTAGAAAACAACAGTTAAATATTCTGAAGGATGTTAGTGGAATAATAAAGCCTTCAAGAATGACATTGCTTTTGGGCCCTCCAAATTCTGGAAAAACCACACTCCTGTTGGCCTTGGCTGGAAAACTTGATCCAAAACTGAAGTTTTCTGGAAAGGTGACTTATAATGGTCATGAGATGAATGAGTTTGTGCCTCAAAGAACTGCTGCTTATGTGGATCAACATGATCTTCACATAGGAGAAATGACTGTTAGAGAAACCTTGGCTTTCTCAGCAAGAGTCCAAGGAGTCGGGCCACGTTATGACTTGCTAGCAGAATTGTCGAGAAGAGAAAAACATGCAAATATCATGCCTGATCCAGATATTGATGTGTACATGAAGGCTATTGCAACTGAAGGCCAGAAGGCAAATTTGATAACAGATTATGTCCTAAGGATTTTGGGACTAGAGATATGTGCTGATACTGTTGTAGGAAATGCAATGTTAAGAGGTATCTCTGGTGGACAAAAGAAACGCGTTACAACTGGGGAGATGTTGGTTGGACCATATAAAGCTCTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACTTTCCAAATTGTGAATTCAATGAAGCATTATGTGCACATTCTCAAAGGAACCGTGGTGATCTCACTCCTGCAGCCACCACCAGAGACCTACAATCTTTTTGATGACATTATTCTACTCTCTGATAGTCACATTATATACCAGGGTCCGCGCGAGCACGTACTTGAATTTTTCGAATCAATCGGTTTTAAATGTCCTAATAGAAAAGGAGTAGCTGATTTTTTGCAAGAAGTGACATCAAGGAAAGACCAAGAGCAGTACTGGCAACACAAAGCTCAGCCATATAGATTTGTCACAGCTGAAGAGTTTTCTGATGCATTTCAATCATTTCATGTTGGCATAAGACTTGGTGATGAACTTGGTACTGAATTTGACAAGTCTAAGAGCCATCCATCTGCCTTGACAACCAAGAAATATGGAGTTGGAAAATTGGAACTGTATAAAGCTTGCTTATCGAGGGAATATTTACTTATGAAACGCAATTCATTTGTCTACATCTTCAAGCTTGGCCAAGTATGTATAATGGCAATGATTGCAATGACCATCTTCTTCCGGACTGAGATGCACCATGATTCAGTGACTCATGGAGGCATATATGTAGGTGCATTGTTCTTTGGTGTTATAGTGATAATGTTCAATGGAATGGCTGAAATTTCCATGGTAGTTTCAAGGCTTCCTGTTTTCTACAAGCAAAGGGGATATCTCTTTTACCCTCCATGGGCATTTGCTCTTCCTGCATGGATCCTAAAATTCCCTTTGACTTTTGTGGAAGTTGCTGTTTGGGTATTCCTCACCTACTATGTCATTGGTTTTGATCCATATATTGGAAGATTTTTGAGACAATACCTTATTCTTGTACTAGTACACCAGATGGCTTCTGCATTATTCAGATTCATTGCAGCAGTTGGAAGGGATATGACAATGGCTCTTACATTTGGATCATTTGCACTTGCCATCCTTTTCTCAATGAGTGGTTTTGCCCTATCAAAAGACAATATAAAAAAATGGTGGATATGGGGATTTTGGATATCACCTATGATGTATGCCCAAAATGCCATGGTAAATAATGAGTTCCTTGGGAATAAATGGAAACATGTTCTTCCTAACTCGAAAGAGCCTATAGGAGTTGAAGTTTTGAAATCTCGCGGTTTCTTCACTGAGTCATACTTTTACTGGATATGCGTCGGTGCTTTGATTGGATATACATTAGTTCTCAACTTTGGATATATACTTGCTCTCACTTTCTTGAATCCACTTGGGAAGCATCAAACTGTCATACCAGAGGGGTCACAGCACTCAAATAAAGTGAGAAATGGCGAAATTACTTTATCCAGTAGAAAAGAAACAGTTGTTGTAGAGACAAATCATAGTAGGAAAAGAGGAATGGTTCTTCCTTTTGAACCACATTCAATCACCTTTGATGAAGTTACATATTCTGTAGACATGCCACAGGAAATGCGGAACCGAGGTGTGCTTGAGGATAAGTTGGTTCTTTTGAAGGGTGTAAGTGGAGCTTTCAGACCAGGTGTTCTCACTGCTCTAATGGGAATCACTGGTGCTGGCAAGACAACTCTGATGGATGTACTTTCTGGTAGAAAAACTGGTGGATATATCGGTGGTAACGTCACAATTTCTGGCTTTCCAAAAAAGCAAGAAACCTTTGCAAGAATTTCTGGATACTGTGAGCAAAATGATATCCACTCTCCTTGTGTTACAGTCTATGAATCATTGCTCTATTCAGCATGGCTCCGATTGTCCCCAAACATCAATGCTGAAACTAGATCGATGTTCATTGAGGAAGTCATAGAACTTGTTGAACTGAAACCACTGCAAAACGCATTAGTAGGATTGCCTGGTGTTAGTGGTCTCTCAACGGAGCAGCGCAAAAGGTTGACTATTGCAGTTGAGTTGGTAGCTAATCCTTCTATAATATTCATGGATGAACCAACTTCTGGGCTAGATGCAAGGGCTGCTGCTATTGTGATGCGAACAGTTAGGAACACAGTAGACACTGGAAGAACGGTTGTTTGTACCATCCACCAACCTAGCATTGATGTATTTGAATCTTTTGATGAGCTTTTGCTACTTAAGCAAGGAGGGCAAGAGATGTATGTAGGGCCACTTGGACATCATTCTTCGAATTTAATCAGTTACTTTGAGGGTATCCAAGGTATTAGCAAGATTAAAGACGGTTATAATCCAGCCACATGGATGTTGGAAGTCACAACATCATCTAAAGAAGTGGAATTAGGGATTGATTTTGCAGAAGTGTACAAAAACTCAGAGTTGTACAGGAGTAACAAGGCACTTATCAAAGAATTGAGTACACCGGCTCCTGGTTCGAAAGATCTTTATTTTCATTCACAATACTCAAGATCCTTTTTTACACAATGCATGGCTTGCTTATGGAAACAACATTGGTCTTACTGGCGTAATCCTGAATACACTGTCGTAAGATTTCTGTACTCATCCGCGGTGGCTGTTTTGCTTGGAAGCATGTTTTGGGACCTCGGCTCCAAAATTGAAAGGGATCAAGATCTCTTTAATGCCATGGGATCCATGTATGCTGCTGTTATCCTAATCGGCGTAAAAAATGGTAGTTCAGTGCAGCCAGTGGTTGCAGTTGAAAGAACAGTCTTTTATAGAGAAAGAGCGGCCGGAATGTATTCAGCTTTCCCATATGCTTTTGGTCAGGTTGTGATTGAGCTTCCATATGTGTTTGTACAATCTGTGGTCTATGGCATTATAGTGTATGCTATGATTGGTTTTGAGTGGACTGTGGTTAAAGTTATGTGGTGCATATTCTACATGTTTTTCACCTTCCTCTACTTCACCTACTATGGCATGATGTCAGTGGCCATGACCCCAAACAATCACATTTCCACTATAATTTCCTCTGCATTCTATTCAGCATGGAATCTCTTCTCAGGATTCATAGTCCCAAGACCGAGGATACCAGTGTGGTGGAGGTGGTACAGTTGGGCAAATCCAGTAGCTTGGAGTTTGTATGGATTAGTGGCTTCACAATATGGAGATATAAAACACAACATTGATACCAATGATGGAAGACAAACAGTAGAAGGTTTTGTGAGAAATTACTTTGGTTTCAAGCATGATTTTCTAGGAGTGGTTGCTATTGTTAATGTTGCATTTCCAATAGTTTTTGCTTTGGTTTTTGCCATATCAATCAAGATGTTCAATTTCCAAAGGCGTTAA 4278 0.4004 MMEGGGSFRIDSSSIWRNTDAAEIFSNSFHQEDDEDALKWAAIQKLPTFARLRKGLLTSLQGEATEIDIENLGLQERRDLLERLVRLAEKDNEEFLLKLKNRIDRVGIDLPTIEVRFDHLNIEAEAHVGSRSLPTFTNSMVNIVEGLLNSLHVLPSRKQQLNILKDVSGIIKPSRMTLLLGPPNSGKTTLLLALAGKLDPKLKFSGKVTYNGHEMNEFVPQRTAAYVDQHDLHIGEMTVRETLAFSARVQGVGPRYDLLAELSRREKHANIMPDPDIDVYMKAIATEGQKANLITDYVLRILGLEICADTVVGNAMLRGISGGQKKRVTTGEMLVGPYKALFMDEISTGLDSSTTFQIVNSMKHYVHILKGTVVISLLQPPPETYNLFDDIILLSDSHIIYQGPREHVLEFFESIGFKCPNRKGVADFLQEVTSRKDQEQYWQHKAQPYRFVTAEEFSDAFQSFHVGIRLGDELGTEFDKSKSHPSALTTKKYGVGKLELYKACLSREYLLMKRNSFVYIFKLGQVCIMAMIAMTIFFRTEMHHDSVTHGGIYVGALFFGVIVIMFNGMAEISMVVSRLPVFYKQRGYLFYPPWAFALPAWILKFPLTFVEVAVWVFLTYYVIGFDPYIGRFLRQYLILVLVHQMASALFRFIAAVGRDMTMALTFGSFALAILFSMSGFALSKDNIKKWWIWGFWISPMMYAQNAMVNNEFLGNKWKHVLPNSKEPIGVEVLKSRGFFTESYFYWICVGALIGYTLVLNFGYILALTFLNPLGKHQTVIPEGSQHSNKVRNGEITLSSRKETVVVETNHSRKRGMVLPFEPHSITFDEVTYSVDMPQEMRNRGVLEDKLVLLKGVSGAFRPGVLTALMGITGAGKTTLMDVLSGRKTGGYIGGNVTISGFPKKQETFARISGYCEQNDIHSPCVTVYESLLYSAWLRLSPNINAETRSMFIEEVIELVELKPLQNALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDVFESFDELLLLKQGGQEMYVGPLGHHSSNLISYFEGIQGISKIKDGYNPATWMLEVTTSSKEVELGIDFAEVYKNSELYRSNKALIKELSTPAPGSKDLYFHSQYSRSFFTQCMACLWKQHWSYWRNPEYTVVRFLYSSAVAVLLGSMFWDLGSKIERDQDLFNAMGSMYAAVILIGVKNGSSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIELPYVFVQSVVYGIIVYAMIGFEWTVVKVMWCIFYMFFTFLYFTYYGMMSVAMTPNNHISTIISSAFYSAWNLFSGFIVPRPRIPVWWRWYSWANPVAWSLYGLVASQYGDIKHNIDTNDGRQTVEGFVRNYFGFKHDFLGVVAIVNVAFPIVFALVFAISIKMFNFQRR* 1426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3377 1425 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 2 1425 - -
Tpr6g3377 1425 PANTHER ATP-BINDING CASSETTE TRANSPORTER 2 1425 - -
Tpr6g3377 1425 Pfam Plant PDR ABC transporter associated 717 780 IPR013581 -
Tpr6g3377 1425 CDD ABCG_PDR_domain1 155 403 IPR034001 -
Tpr6g3377 1425 CDD ABCG_PDR_domain2 822 1060 IPR034003 -
Tpr6g3377 1425 Pfam ABC transporter 164 346 IPR003439 GO:0005524
Tpr6g3377 1425 Pfam ABC transporter 853 1005 IPR003439 GO:0005524
Tpr6g3377 1425 Pfam ABC-transporter N-terminal 88 138 IPR029481 -
Tpr6g3377 1425 SMART AAA_5 173 398 IPR003593 -
Tpr6g3377 1425 SMART AAA_5 862 1054 IPR003593 -
Tpr6g3377 1425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 841 1058 IPR027417 -
Tpr6g3377 1425 Gene3D - 150 459 IPR027417 -
Tpr6g3377 1425 Gene3D - 825 1068 IPR027417 -
Tpr6g3377 1425 Pfam ABC-2 type transporter 379 455 IPR043926 GO:0140359
Tpr6g3377 1425 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 825 1077 IPR003439 GO:0005524
Tpr6g3377 1425 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 148 421 IPR003439 GO:0005524
Tpr6g3377 1425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 420 IPR027417 -
Tpr6g3377 1425 Pfam ABC-2 type transporter 500 712 IPR013525 GO:0016020|GO:0140359
Tpr6g3377 1425 Pfam ABC-2 type transporter 1150 1364 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3377 Tpr-Chr6 36425877 36433402 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3377 K08711 - gmx:732607 2422.51